Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:27341042-28587234

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sox11 12 27334264 to 27342574 8310 - protein coding gene SRY (sex determining region Y)-box 11
Cpgi4507 12 27341101 to 27343659 2558 CpG island CpG island 4507
Tssr115996 12 27341120 to 27341132 12 - TSS region transcription start site region 115996
Tssr115997 12 27341146 to 27341161 15 - TSS region transcription start site region 115997
Tssr115998 12 27341604 to 27341615 11 - TSS region transcription start site region 115998
Tssr115999 12 27341648 to 27341659 11 - TSS region transcription start site region 115999
Tssr116000 12 27341684 to 27341697 13 - TSS region transcription start site region 116000
Tssr116001 12 27342391 to 27342417 26 - TSS region transcription start site region 116001
Tssr116002 12 27342445 to 27342457 12 - TSS region transcription start site region 116002
Tssr116003 12 27342696 to 27342726 30 - TSS region transcription start site region 116003
Tssr113045 12 27342906 to 27342927 21 + TSS region transcription start site region 113045
Gm30855 12 27345139 to 27359073 13934 + lncRNA gene predicted gene, 30855
D12Mit84 12 27570643 to 27570810 167 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 84
Bglu15 12 27570643 to 27570810 167 QTL blood glucose level 15
Gm4166 12 27598201 to 27615362 17161 + lincRNA gene predicted gene 4166
Gm24326 12 27631803 to 27631927 124 + snoRNA gene predicted gene, 24326
D12Mit284 12 27765921 to 27766042 121 DNA segment DNA Segment, Chr 12, Massachusetts Institute of Technology 284
Gm45941 12 27946042 to 27982234 36192 + lincRNA gene predicted gene, 45941
Gm31025 12 27995008 to 28010046 15038 + lincRNA gene predicted gene, 31025
Gm46326 12 28054041 to 28056040 1999 + lncRNA gene predicted gene, 46326
Gm25923 12 28060391 to 28060528 137 - rRNA gene predicted gene, 25923
Gm47872 12 28249759 to 28339409 89650 - lincRNA gene predicted gene, 47872
Gm47871 12 28320635 to 28321058 423 - lincRNA gene predicted gene, 47871
Gm25564 12 28350263 to 28350394 131 + snoRNA gene predicted gene, 25564
Dcdc2c 12 28437795 to 28552399 114604 - protein coding gene doublecortin domain containing 2C
Gm47878 12 28523050 to 28523356 306 + pseudogene predicted gene, 47878
D12Mit1004 12 28543916 to 28544031 115 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 1004
Cpgi4508 12 28551895 to 28552499 604 CpG island CpG island 4508
Tssr116004 12 28552393 to 28552404 11 - TSS region transcription start site region 116004
Allc 12 28553755 to 28582523 28768 - protein coding gene allantoicase
Tssr116005 12 28582517 to 28582533 16 - TSS region transcription start site region 116005
Tssr116006 12 28582538 to 28582559 21 - TSS region transcription start site region 116006