Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:26640237-27564995

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71 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm47847 12 26597259 to 26645747 48488 + lincRNA gene predicted gene, 47847
4933409F18Rik 12 26814371 to 26834873 20502 - lincRNA gene RIKEN cDNA 4933409F18 gene
Tssr115955 12 26834790 to 26834801 11 - TSS region transcription start site region 115955
Tssr115956 12 26834871 to 26834882 11 - TSS region transcription start site region 115956
Gm30290 12 26877471 to 26887681 10210 + lncRNA gene predicted gene, 30290
D12Mit283 12 26906571 to 26906681 110 DNA segment DNA Segment, Chr 12, Massachusetts Institute of Technology 283
Gm30350 12 26967077 to 26967833 756 + lncRNA gene predicted gene, 30350
D12Ertd129e 12 26984502 to 26984714 212 DNA segment DNA segment, Chr 12, ERATO Doi 129, expressed
Gm30515 12 27029887 to 27083550 53663 - lncRNA gene predicted gene, 30515
D12Mit185 12 27065591 to 27065736 145 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 185
Gm30401 12 27083607 to 27133021 49414 + lncRNA gene predicted gene, 30401
Gm20187 12 27090237 to 27114995 24758 - lncRNA gene predicted gene, 20187
Gm9866 12 27140796 to 27160516 19720 - lincRNA gene predicted gene 9866
Tssr115957 12 27160447 to 27160476 29 - TSS region transcription start site region 115957
Tssr115958 12 27160477 to 27160492 15 - TSS region transcription start site region 115958
Tssr115959 12 27160498 to 27160522 24 - TSS region transcription start site region 115959
Gm40872 12 27169772 to 27208051 38279 - lncRNA gene predicted gene, 40872
Tssr113041 12 27183205 to 27183248 43 + TSS region transcription start site region 113041
Gm47860 12 27262540 to 27266567 4027 - pseudogene predicted gene, 47860
Sox11 12 27334264 to 27342574 8310 - protein coding gene SRY (sex determining region Y)-box 11
Tssr115960 12 27334776 to 27334779 3 - TSS region transcription start site region 115960
Tssr115961 12 27335136 to 27335144 8 - TSS region transcription start site region 115961
Tssr115962 12 27335574 to 27335585 11 - TSS region transcription start site region 115962
Tssr115963 12 27336053 to 27336064 11 - TSS region transcription start site region 115963
Tssr113042 12 27336213 to 27336223 10 + TSS region transcription start site region 113042
Tssr113043 12 27336369 to 27336373 4 + TSS region transcription start site region 113043
Tssr115964 12 27336404 to 27336439 35 - TSS region transcription start site region 115964
Tssr115965 12 27336467 to 27336488 21 - TSS region transcription start site region 115965
Tssr115966 12 27336556 to 27336567 11 - TSS region transcription start site region 115966
Tssr115967 12 27336828 to 27336837 9 - TSS region transcription start site region 115967
Tssr115968 12 27336842 to 27336851 9 - TSS region transcription start site region 115968
Tssr115969 12 27336919 to 27336932 13 - TSS region transcription start site region 115969
Tssr115970 12 27336944 to 27336967 23 - TSS region transcription start site region 115970
Tssr115971 12 27336987 to 27337023 36 - TSS region transcription start site region 115971
Tssr115972 12 27337121 to 27337136 15 - TSS region transcription start site region 115972
Tssr115973 12 27337487 to 27337498 11 - TSS region transcription start site region 115973
Tssr115974 12 27337535 to 27337555 20 - TSS region transcription start site region 115974
Tssr115975 12 27337575 to 27337586 11 - TSS region transcription start site region 115975
Tssr115976 12 27337597 to 27337606 9 - TSS region transcription start site region 115976
Tssr115977 12 27337611 to 27337624 13 - TSS region transcription start site region 115977
Tssr115978 12 27338243 to 27338250 7 - TSS region transcription start site region 115978
Tssr115979 12 27338335 to 27338340 5 - TSS region transcription start site region 115979
Tssr115980 12 27338502 to 27338518 16 - TSS region transcription start site region 115980
Cpgi4506 12 27338747 to 27339713 966 CpG island CpG island 4506
Tssr115981 12 27339183 to 27339220 37 - TSS region transcription start site region 115981
Tssr113044 12 27339363 to 27339369 6 + TSS region transcription start site region 113044
Tssr115982 12 27339406 to 27339414 8 - TSS region transcription start site region 115982
Tssr115983 12 27340184 to 27340197 13 - TSS region transcription start site region 115983
Tssr115984 12 27340199 to 27340204 5 - TSS region transcription start site region 115984
Tssr115985 12 27340257 to 27340268 11 - TSS region transcription start site region 115985
Tssr115986 12 27340273 to 27340284 11 - TSS region transcription start site region 115986
Tssr115987 12 27340294 to 27340310 16 - TSS region transcription start site region 115987
Tssr115988 12 27340321 to 27340332 11 - TSS region transcription start site region 115988
Tssr115989 12 27340369 to 27340374 5 - TSS region transcription start site region 115989
Tssr115990 12 27340440 to 27340457 17 - TSS region transcription start site region 115990
Tssr115991 12 27340527 to 27340542 15 - TSS region transcription start site region 115991
Tssr115992 12 27340618 to 27340642 24 - TSS region transcription start site region 115992
Tssr115993 12 27340719 to 27340728 9 - TSS region transcription start site region 115993
Tssr115994 12 27340736 to 27340746 10 - TSS region transcription start site region 115994
Tssr115995 12 27340753 to 27340764 11 - TSS region transcription start site region 115995
Cpgi4507 12 27341101 to 27343659 2558 CpG island CpG island 4507
Tssr115996 12 27341120 to 27341132 12 - TSS region transcription start site region 115996
Tssr115997 12 27341146 to 27341161 15 - TSS region transcription start site region 115997
Tssr115998 12 27341604 to 27341615 11 - TSS region transcription start site region 115998
Tssr115999 12 27341648 to 27341659 11 - TSS region transcription start site region 115999
Tssr116000 12 27341684 to 27341697 13 - TSS region transcription start site region 116000
Tssr116001 12 27342391 to 27342417 26 - TSS region transcription start site region 116001
Tssr116002 12 27342445 to 27342457 12 - TSS region transcription start site region 116002
Tssr116003 12 27342696 to 27342726 30 - TSS region transcription start site region 116003
Tssr113045 12 27342906 to 27342927 21 + TSS region transcription start site region 113045
Gm30855 12 27345139 to 27359073 13934 + lncRNA gene predicted gene, 30855