Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:26479371-27169873

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cmpk2 12 26469212 to 26479837 10625 + protein coding gene cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial
D12Mit268 12 26482565 to 26482686 121 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 268
Gm46344 12 26485905 to 26486791 886 - pseudogene predicted gene, 46344
1700020D12Rik 12 26572108 to 26602309 30201 - lincRNA gene RIKEN cDNA 1700020D12 gene
Gm47847 12 26597259 to 26645747 48488 + lincRNA gene predicted gene, 47847
4933409F18Rik 12 26814371 to 26834873 20502 - lincRNA gene RIKEN cDNA 4933409F18 gene
Tssr115955 12 26834790 to 26834801 11 - TSS region transcription start site region 115955
Tssr115956 12 26834871 to 26834882 11 - TSS region transcription start site region 115956
Gm30290 12 26877471 to 26887681 10210 + lncRNA gene predicted gene, 30290
D12Mit283 12 26906571 to 26906681 110 DNA segment DNA Segment, Chr 12, Massachusetts Institute of Technology 283
Gm30350 12 26967077 to 26967833 756 + lncRNA gene predicted gene, 30350
D12Ertd129e 12 26984502 to 26984714 212 DNA segment DNA segment, Chr 12, ERATO Doi 129, expressed
Gm30515 12 27029887 to 27083550 53663 - lncRNA gene predicted gene, 30515
D12Mit185 12 27065591 to 27065736 145 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 185
Gm30401 12 27083607 to 27133021 49414 + lncRNA gene predicted gene, 30401
Gm20187 12 27090237 to 27114995 24758 - lncRNA gene predicted gene, 20187
Gm9866 12 27140796 to 27160516 19720 - lincRNA gene predicted gene 9866
Tssr115957 12 27160447 to 27160476 29 - TSS region transcription start site region 115957
Tssr115958 12 27160477 to 27160492 15 - TSS region transcription start site region 115958
Tssr115959 12 27160498 to 27160522 24 - TSS region transcription start site region 115959
Gm40872 12 27169772 to 27208051 38279 - lncRNA gene predicted gene, 40872