Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:26467471-27297681

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55 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi4505 12 26469149 to 26470088 939 CpG island CpG island 4505
Tssr115952 12 26469152 to 26469163 11 - TSS region transcription start site region 115952
Cmpk2 12 26469212 to 26479837 10625 + protein coding gene cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial
Tssr115953 12 26469236 to 26469247 11 - TSS region transcription start site region 115953
Tssr113013 12 26469373 to 26469397 24 + TSS region transcription start site region 113013
Tssr113014 12 26469906 to 26469981 75 + TSS region transcription start site region 113014
Tssr113015 12 26470349 to 26470360 11 + TSS region transcription start site region 113015
Tssr113016 12 26470427 to 26470456 29 + TSS region transcription start site region 113016
Tssr113017 12 26470507 to 26470511 4 + TSS region transcription start site region 113017
Tssr113018 12 26472619 to 26472635 16 + TSS region transcription start site region 113018
Tssr113019 12 26473403 to 26473415 12 + TSS region transcription start site region 113019
Tssr113020 12 26474032 to 26474067 35 + TSS region transcription start site region 113020
Tssr115954 12 26474078 to 26474096 18 - TSS region transcription start site region 115954
Tssr113021 12 26476208 to 26476219 11 + TSS region transcription start site region 113021
Tssr113022 12 26477051 to 26477064 13 + TSS region transcription start site region 113022
Tssr113023 12 26478011 to 26478021 10 + TSS region transcription start site region 113023
Tssr113024 12 26478097 to 26478111 14 + TSS region transcription start site region 113024
Tssr113025 12 26478116 to 26478130 14 + TSS region transcription start site region 113025
Tssr113026 12 26478141 to 26478159 18 + TSS region transcription start site region 113026
Tssr113027 12 26478161 to 26478189 28 + TSS region transcription start site region 113027
Tssr113028 12 26478218 to 26478231 13 + TSS region transcription start site region 113028
Tssr113029 12 26478254 to 26478277 23 + TSS region transcription start site region 113029
Tssr113030 12 26478339 to 26478367 28 + TSS region transcription start site region 113030
Tssr113031 12 26478390 to 26478402 12 + TSS region transcription start site region 113031
Tssr113032 12 26478470 to 26478481 11 + TSS region transcription start site region 113032
Tssr113033 12 26478853 to 26478872 19 + TSS region transcription start site region 113033
Tssr113034 12 26479034 to 26479045 11 + TSS region transcription start site region 113034
Tssr113035 12 26479108 to 26479121 13 + TSS region transcription start site region 113035
Tssr113036 12 26479177 to 26479191 14 + TSS region transcription start site region 113036
Tssr113037 12 26479198 to 26479214 16 + TSS region transcription start site region 113037
Tssr113038 12 26479221 to 26479234 13 + TSS region transcription start site region 113038
Tssr113039 12 26479239 to 26479260 21 + TSS region transcription start site region 113039
Tssr113040 12 26479308 to 26479319 11 + TSS region transcription start site region 113040
D12Mit268 12 26482565 to 26482686 121 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 268
Gm46344 12 26485905 to 26486791 886 - pseudogene predicted gene, 46344
1700020D12Rik 12 26572108 to 26602309 30201 - lincRNA gene RIKEN cDNA 1700020D12 gene
Gm47847 12 26597259 to 26645747 48488 + lincRNA gene predicted gene, 47847
4933409F18Rik 12 26814371 to 26834873 20502 - lincRNA gene RIKEN cDNA 4933409F18 gene
Tssr115955 12 26834790 to 26834801 11 - TSS region transcription start site region 115955
Tssr115956 12 26834871 to 26834882 11 - TSS region transcription start site region 115956
Gm30290 12 26877471 to 26887681 10210 + lncRNA gene predicted gene, 30290
D12Mit283 12 26906571 to 26906681 110 DNA segment DNA Segment, Chr 12, Massachusetts Institute of Technology 283
Gm30350 12 26967077 to 26967833 756 + lncRNA gene predicted gene, 30350
D12Ertd129e 12 26984502 to 26984714 212 DNA segment DNA segment, Chr 12, ERATO Doi 129, expressed
Gm30515 12 27029887 to 27083550 53663 - lncRNA gene predicted gene, 30515
D12Mit185 12 27065591 to 27065736 145 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 185
Gm30401 12 27083607 to 27133021 49414 + lncRNA gene predicted gene, 30401
Gm20187 12 27090237 to 27114995 24758 - lncRNA gene predicted gene, 20187
Gm9866 12 27140796 to 27160516 19720 - lincRNA gene predicted gene 9866
Tssr115957 12 27160447 to 27160476 29 - TSS region transcription start site region 115957
Tssr115958 12 27160477 to 27160492 15 - TSS region transcription start site region 115958
Tssr115959 12 27160498 to 27160522 24 - TSS region transcription start site region 115959
Gm40872 12 27169772 to 27208051 38279 - lncRNA gene predicted gene, 40872
Tssr113041 12 27183205 to 27183248 43 + TSS region transcription start site region 113041
Gm47860 12 27262540 to 27266567 4027 - pseudogene predicted gene, 47860