Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:26365257-28315268

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194 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rnf144a 12 26306794 to 26415320 108526 - protein coding gene ring finger protein 144A
4930549C15Rik 12 26346717 to 26371748 25031 + antisense lncRNA gene RIKEN cDNA 4930549C15 gene
Tssr115898 12 26413998 to 26414013 15 - TSS region transcription start site region 115898
Cpgi4504 12 26414421 to 26415663 1242 CpG island CpG island 4504
Mir6538 12 26414901 to 26415010 109 - miRNA gene microRNA 6538
Tssr115899 12 26415199 to 26415214 15 - TSS region transcription start site region 115899
Tssr115900 12 26415228 to 26415242 14 - TSS region transcription start site region 115900
Tssr115901 12 26415257 to 26415303 46 - TSS region transcription start site region 115901
Gm47799 12 26431153 to 26436819 5666 - pseudogene predicted gene, 47799
D12Mit219 12 26441005 to 26441113 108 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 219
Fcsa7 12 26441005 to 26441113 108 QTL femoral cross-sectional area 7
Rsad2 12 26442746 to 26456452 13706 - protein coding gene radical S-adenosyl methionine domain containing 2
Tssr115902 12 26442857 to 26442870 13 - TSS region transcription start site region 115902
Tssr115903 12 26443189 to 26443200 11 - TSS region transcription start site region 115903
Tssr115904 12 26443206 to 26443224 18 - TSS region transcription start site region 115904
Tssr115905 12 26443511 to 26443522 11 - TSS region transcription start site region 115905
Tssr115906 12 26443639 to 26443642 3 - TSS region transcription start site region 115906
Tssr115907 12 26443694 to 26443701 7 - TSS region transcription start site region 115907
Tssr115908 12 26443734 to 26443745 11 - TSS region transcription start site region 115908
Tssr112998 12 26443741 to 26443753 12 + TSS region transcription start site region 112998
Tssr112999 12 26443788 to 26443818 30 + TSS region transcription start site region 112999
Tssr115909 12 26443820 to 26443829 9 - TSS region transcription start site region 115909
Tssr115910 12 26443872 to 26443883 11 - TSS region transcription start site region 115910
Tssr113000 12 26443912 to 26443919 7 + TSS region transcription start site region 113000
Tssr115911 12 26443922 to 26443931 9 - TSS region transcription start site region 115911
Tssr115912 12 26443936 to 26443945 9 - TSS region transcription start site region 115912
Tssr115913 12 26443971 to 26443980 9 - TSS region transcription start site region 115913
Tssr115914 12 26444023 to 26444028 5 - TSS region transcription start site region 115914
Tssr115915 12 26444052 to 26444071 19 - TSS region transcription start site region 115915
Tssr115916 12 26444109 to 26444112 3 - TSS region transcription start site region 115916
Tssr115917 12 26444155 to 26444162 7 - TSS region transcription start site region 115917
Tssr115918 12 26444174 to 26444177 3 - TSS region transcription start site region 115918
Tssr115919 12 26444201 to 26444208 7 - TSS region transcription start site region 115919
Tssr115920 12 26444228 to 26444240 12 - TSS region transcription start site region 115920
Tssr113001 12 26444386 to 26444406 20 + TSS region transcription start site region 113001
Tssr113002 12 26444410 to 26444430 20 + TSS region transcription start site region 113002
Tssr113003 12 26444485 to 26444518 33 + TSS region transcription start site region 113003
Tssr115921 12 26444533 to 26444616 83 - TSS region transcription start site region 115921
Tssr113004 12 26444545 to 26444569 24 + TSS region transcription start site region 113004
Tssr113005 12 26444571 to 26444578 7 + TSS region transcription start site region 113005
Tssr115922 12 26444629 to 26444641 12 - TSS region transcription start site region 115922
Tssr115923 12 26444712 to 26444734 22 - TSS region transcription start site region 115923
Tssr115924 12 26444783 to 26444794 11 - TSS region transcription start site region 115924
Tssr115925 12 26444798 to 26444809 11 - TSS region transcription start site region 115925
Tssr113006 12 26444934 to 26444945 11 + TSS region transcription start site region 113006
Tssr113007 12 26445018 to 26445035 17 + TSS region transcription start site region 113007
Tssr115926 12 26445147 to 26445160 13 - TSS region transcription start site region 115926
Tssr113008 12 26445186 to 26445203 17 + TSS region transcription start site region 113008
Tssr115927 12 26445191 to 26445201 10 - TSS region transcription start site region 115927
Tssr113009 12 26445204 to 26445218 14 + TSS region transcription start site region 113009
Tssr113010 12 26445354 to 26445408 54 + TSS region transcription start site region 113010
Tssr115928 12 26447172 to 26447196 24 - TSS region transcription start site region 115928
Tssr115929 12 26447202 to 26447210 8 - TSS region transcription start site region 115929
Tssr115930 12 26447478 to 26447495 17 - TSS region transcription start site region 115930
Tssr115931 12 26447516 to 26447527 11 - TSS region transcription start site region 115931
Tssr115932 12 26447923 to 26447943 20 - TSS region transcription start site region 115932
Tssr115933 12 26447947 to 26447958 11 - TSS region transcription start site region 115933
Tssr115934 12 26448154 to 26448175 21 - TSS region transcription start site region 115934
Tssr115935 12 26448200 to 26448225 25 - TSS region transcription start site region 115935
Tssr115936 12 26448375 to 26448389 14 - TSS region transcription start site region 115936
Tssr115937 12 26448573 to 26448586 13 - TSS region transcription start site region 115937
Tssr115938 12 26448611 to 26448644 33 - TSS region transcription start site region 115938
Tssr113011 12 26448658 to 26448677 19 + TSS region transcription start site region 113011
Tssr115939 12 26448667 to 26448681 14 - TSS region transcription start site region 115939
Tssr115940 12 26448682 to 26448713 31 - TSS region transcription start site region 115940
Tssr115941 12 26448716 to 26448742 26 - TSS region transcription start site region 115941
Tssr115942 12 26450537 to 26450549 12 - TSS region transcription start site region 115942
Tssr115943 12 26450579 to 26450658 79 - TSS region transcription start site region 115943
Tssr115944 12 26450675 to 26450684 9 - TSS region transcription start site region 115944
Tssr115945 12 26450715 to 26450778 63 - TSS region transcription start site region 115945
Tssr115946 12 26453722 to 26453733 11 - TSS region transcription start site region 115946
Tssr115947 12 26454048 to 26454160 112 - TSS region transcription start site region 115947
Tssr115948 12 26455206 to 26455224 18 - TSS region transcription start site region 115948
Tssr115949 12 26455602 to 26455623 21 - TSS region transcription start site region 115949
Tssr115950 12 26455726 to 26455737 11 - TSS region transcription start site region 115950
Tssr113012 12 26456116 to 26456127 11 + TSS region transcription start site region 113012
Tssr115951 12 26456423 to 26456440 17 - TSS region transcription start site region 115951
Cpgi4505 12 26469149 to 26470088 939 CpG island CpG island 4505
Tssr115952 12 26469152 to 26469163 11 - TSS region transcription start site region 115952
Cmpk2 12 26469212 to 26479837 10625 + protein coding gene cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial
Tssr115953 12 26469236 to 26469247 11 - TSS region transcription start site region 115953
Tssr113013 12 26469373 to 26469397 24 + TSS region transcription start site region 113013
Tssr113014 12 26469906 to 26469981 75 + TSS region transcription start site region 113014
Tssr113015 12 26470349 to 26470360 11 + TSS region transcription start site region 113015
Tssr113016 12 26470427 to 26470456 29 + TSS region transcription start site region 113016
Tssr113017 12 26470507 to 26470511 4 + TSS region transcription start site region 113017
Tssr113018 12 26472619 to 26472635 16 + TSS region transcription start site region 113018
Tssr113019 12 26473403 to 26473415 12 + TSS region transcription start site region 113019
Tssr113020 12 26474032 to 26474067 35 + TSS region transcription start site region 113020
Tssr115954 12 26474078 to 26474096 18 - TSS region transcription start site region 115954
Tssr113021 12 26476208 to 26476219 11 + TSS region transcription start site region 113021
Tssr113022 12 26477051 to 26477064 13 + TSS region transcription start site region 113022
Tssr113023 12 26478011 to 26478021 10 + TSS region transcription start site region 113023
Tssr113024 12 26478097 to 26478111 14 + TSS region transcription start site region 113024
Tssr113025 12 26478116 to 26478130 14 + TSS region transcription start site region 113025
Tssr113026 12 26478141 to 26478159 18 + TSS region transcription start site region 113026
Tssr113027 12 26478161 to 26478189 28 + TSS region transcription start site region 113027
Tssr113028 12 26478218 to 26478231 13 + TSS region transcription start site region 113028
Tssr113029 12 26478254 to 26478277 23 + TSS region transcription start site region 113029
Tssr113030 12 26478339 to 26478367 28 + TSS region transcription start site region 113030
Tssr113031 12 26478390 to 26478402 12 + TSS region transcription start site region 113031
Tssr113032 12 26478470 to 26478481 11 + TSS region transcription start site region 113032
Tssr113033 12 26478853 to 26478872 19 + TSS region transcription start site region 113033
Tssr113034 12 26479034 to 26479045 11 + TSS region transcription start site region 113034
Tssr113035 12 26479108 to 26479121 13 + TSS region transcription start site region 113035
Tssr113036 12 26479177 to 26479191 14 + TSS region transcription start site region 113036
Tssr113037 12 26479198 to 26479214 16 + TSS region transcription start site region 113037
Tssr113038 12 26479221 to 26479234 13 + TSS region transcription start site region 113038
Tssr113039 12 26479239 to 26479260 21 + TSS region transcription start site region 113039
Tssr113040 12 26479308 to 26479319 11 + TSS region transcription start site region 113040
D12Mit268 12 26482565 to 26482686 121 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 268
Gm46344 12 26485905 to 26486791 886 - pseudogene predicted gene, 46344
1700020D12Rik 12 26572108 to 26602309 30201 - lincRNA gene RIKEN cDNA 1700020D12 gene
Gm47847 12 26597259 to 26645747 48488 + lincRNA gene predicted gene, 47847
4933409F18Rik 12 26814371 to 26834873 20502 - lincRNA gene RIKEN cDNA 4933409F18 gene
Tssr115955 12 26834790 to 26834801 11 - TSS region transcription start site region 115955
Tssr115956 12 26834871 to 26834882 11 - TSS region transcription start site region 115956
Gm30290 12 26877471 to 26887681 10210 + lncRNA gene predicted gene, 30290
D12Mit283 12 26906571 to 26906681 110 DNA segment DNA Segment, Chr 12, Massachusetts Institute of Technology 283
Gm30350 12 26967077 to 26967833 756 + lncRNA gene predicted gene, 30350
D12Ertd129e 12 26984502 to 26984714 212 DNA segment DNA segment, Chr 12, ERATO Doi 129, expressed
Gm30515 12 27029887 to 27083550 53663 - lncRNA gene predicted gene, 30515
D12Mit185 12 27065591 to 27065736 145 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 185
Gm30401 12 27083607 to 27133021 49414 + lncRNA gene predicted gene, 30401
Gm20187 12 27090237 to 27114995 24758 - lncRNA gene predicted gene, 20187
Gm9866 12 27140796 to 27160516 19720 - lincRNA gene predicted gene 9866
Tssr115957 12 27160447 to 27160476 29 - TSS region transcription start site region 115957
Tssr115958 12 27160477 to 27160492 15 - TSS region transcription start site region 115958
Tssr115959 12 27160498 to 27160522 24 - TSS region transcription start site region 115959
Gm40872 12 27169772 to 27208051 38279 - lncRNA gene predicted gene, 40872
Tssr113041 12 27183205 to 27183248 43 + TSS region transcription start site region 113041
Gm47860 12 27262540 to 27266567 4027 - pseudogene predicted gene, 47860
Sox11 12 27334264 to 27342574 8310 - protein coding gene SRY (sex determining region Y)-box 11
Tssr115960 12 27334776 to 27334779 3 - TSS region transcription start site region 115960
Tssr115961 12 27335136 to 27335144 8 - TSS region transcription start site region 115961
Tssr115962 12 27335574 to 27335585 11 - TSS region transcription start site region 115962
Tssr115963 12 27336053 to 27336064 11 - TSS region transcription start site region 115963
Tssr113042 12 27336213 to 27336223 10 + TSS region transcription start site region 113042
Tssr113043 12 27336369 to 27336373 4 + TSS region transcription start site region 113043
Tssr115964 12 27336404 to 27336439 35 - TSS region transcription start site region 115964
Tssr115965 12 27336467 to 27336488 21 - TSS region transcription start site region 115965
Tssr115966 12 27336556 to 27336567 11 - TSS region transcription start site region 115966
Tssr115967 12 27336828 to 27336837 9 - TSS region transcription start site region 115967
Tssr115968 12 27336842 to 27336851 9 - TSS region transcription start site region 115968
Tssr115969 12 27336919 to 27336932 13 - TSS region transcription start site region 115969
Tssr115970 12 27336944 to 27336967 23 - TSS region transcription start site region 115970
Tssr115971 12 27336987 to 27337023 36 - TSS region transcription start site region 115971
Tssr115972 12 27337121 to 27337136 15 - TSS region transcription start site region 115972
Tssr115973 12 27337487 to 27337498 11 - TSS region transcription start site region 115973
Tssr115974 12 27337535 to 27337555 20 - TSS region transcription start site region 115974
Tssr115975 12 27337575 to 27337586 11 - TSS region transcription start site region 115975
Tssr115976 12 27337597 to 27337606 9 - TSS region transcription start site region 115976
Tssr115977 12 27337611 to 27337624 13 - TSS region transcription start site region 115977
Tssr115978 12 27338243 to 27338250 7 - TSS region transcription start site region 115978
Tssr115979 12 27338335 to 27338340 5 - TSS region transcription start site region 115979
Tssr115980 12 27338502 to 27338518 16 - TSS region transcription start site region 115980
Cpgi4506 12 27338747 to 27339713 966 CpG island CpG island 4506
Tssr115981 12 27339183 to 27339220 37 - TSS region transcription start site region 115981
Tssr113044 12 27339363 to 27339369 6 + TSS region transcription start site region 113044
Tssr115982 12 27339406 to 27339414 8 - TSS region transcription start site region 115982
Tssr115983 12 27340184 to 27340197 13 - TSS region transcription start site region 115983
Tssr115984 12 27340199 to 27340204 5 - TSS region transcription start site region 115984
Tssr115985 12 27340257 to 27340268 11 - TSS region transcription start site region 115985
Tssr115986 12 27340273 to 27340284 11 - TSS region transcription start site region 115986
Tssr115987 12 27340294 to 27340310 16 - TSS region transcription start site region 115987
Tssr115988 12 27340321 to 27340332 11 - TSS region transcription start site region 115988
Tssr115989 12 27340369 to 27340374 5 - TSS region transcription start site region 115989
Tssr115990 12 27340440 to 27340457 17 - TSS region transcription start site region 115990
Tssr115991 12 27340527 to 27340542 15 - TSS region transcription start site region 115991
Tssr115992 12 27340618 to 27340642 24 - TSS region transcription start site region 115992
Tssr115993 12 27340719 to 27340728 9 - TSS region transcription start site region 115993
Tssr115994 12 27340736 to 27340746 10 - TSS region transcription start site region 115994
Tssr115995 12 27340753 to 27340764 11 - TSS region transcription start site region 115995
Cpgi4507 12 27341101 to 27343659 2558 CpG island CpG island 4507
Tssr115996 12 27341120 to 27341132 12 - TSS region transcription start site region 115996
Tssr115997 12 27341146 to 27341161 15 - TSS region transcription start site region 115997
Tssr115998 12 27341604 to 27341615 11 - TSS region transcription start site region 115998
Tssr115999 12 27341648 to 27341659 11 - TSS region transcription start site region 115999
Tssr116000 12 27341684 to 27341697 13 - TSS region transcription start site region 116000
Tssr116001 12 27342391 to 27342417 26 - TSS region transcription start site region 116001
Tssr116002 12 27342445 to 27342457 12 - TSS region transcription start site region 116002
Tssr116003 12 27342696 to 27342726 30 - TSS region transcription start site region 116003
Tssr113045 12 27342906 to 27342927 21 + TSS region transcription start site region 113045
Gm30855 12 27345139 to 27359073 13934 + lncRNA gene predicted gene, 30855
D12Mit84 12 27570643 to 27570810 167 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 84
Bglu15 12 27570643 to 27570810 167 QTL blood glucose level 15
Gm4166 12 27598201 to 27615362 17161 + lincRNA gene predicted gene 4166
Gm24326 12 27631803 to 27631927 124 + snoRNA gene predicted gene, 24326
D12Mit284 12 27765921 to 27766042 121 DNA segment DNA Segment, Chr 12, Massachusetts Institute of Technology 284
Gm45941 12 27946042 to 27982234 36192 + lincRNA gene predicted gene, 45941
Gm31025 12 27995008 to 28010046 15038 + lincRNA gene predicted gene, 31025
Gm46326 12 28054041 to 28056040 1999 + lncRNA gene predicted gene, 46326
Gm25923 12 28060391 to 28060528 137 - rRNA gene predicted gene, 25923
Gm47872 12 28249759 to 28339409 89650 - lincRNA gene predicted gene, 47872