MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 12:25952733-26422740

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm29835	12	25979043 to 25991775	12732	+	lncRNA gene	predicted gene, 29835
Gm29687	12	26091962 to 26210505	118543	-	lincRNA gene	predicted gene, 29687
Gm47750	12	26150316 to 26150513	197	+	pseudogene	predicted gene, 47750
Tssr115896	12	26187553 to 26187582	29	-	TSS region	transcription start site region 115896
Tssr3814	12	26187733 to 26187740	7	+	TSS region	transcription start site region 3814
4930480M12Rik	12	26211267 to 26240707	29440	+	lincRNA gene	RIKEN cDNA 4930480M12 gene
D12Mit83	12	26235177 to 26235321	144		DNA segment	DNA segment, Chr 12, Massachusetts Institute of Technology 83
Gm29968	12	26235530 to 26252545	17015	-	lincRNA gene	predicted gene, 29968
Rnf144a	12	26306794 to 26415320	108526	-	protein coding gene	ring finger protein 144A
Tssr115897	12	26346589 to 26346608	19	-	TSS region	transcription start site region 115897
4930549C15Rik	12	26346717 to 26371748	25031	+	antisense lncRNA gene	RIKEN cDNA 4930549C15 gene
Tssr112997	12	26346731 to 26346743	12	+	TSS region	transcription start site region 112997
Tssr115898	12	26413998 to 26414013	15	-	TSS region	transcription start site region 115898
Cpgi4504	12	26414421 to 26415663	1242		CpG island	CpG island 4504
Mir6538	12	26414901 to 26415010	109	-	miRNA gene	microRNA 6538
Tssr115899	12	26415199 to 26415214	15	-	TSS region	transcription start site region 115899
Tssr115900	12	26415228 to 26415242	14	-	TSS region	transcription start site region 115900
Tssr115901	12	26415257 to 26415303	46	-	TSS region	transcription start site region 115901