Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:25845316-26455513

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84 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm47733 12 25871153 to 25871561 408 + lincRNA gene predicted gene, 47733
Gm29835 12 25979043 to 25991775 12732 + lncRNA gene predicted gene, 29835
Gm29687 12 26091962 to 26210505 118543 - lincRNA gene predicted gene, 29687
Gm47750 12 26150316 to 26150513 197 + pseudogene predicted gene, 47750
Tssr115896 12 26187553 to 26187582 29 - TSS region transcription start site region 115896
Tssr3814 12 26187733 to 26187740 7 + TSS region transcription start site region 3814
4930480M12Rik 12 26211267 to 26240707 29440 + lincRNA gene RIKEN cDNA 4930480M12 gene
D12Mit83 12 26235177 to 26235321 144 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 83
Gm29968 12 26235530 to 26252545 17015 - lincRNA gene predicted gene, 29968
Rnf144a 12 26306794 to 26415320 108526 - protein coding gene ring finger protein 144A
Tssr115897 12 26346589 to 26346608 19 - TSS region transcription start site region 115897
4930549C15Rik 12 26346717 to 26371748 25031 + antisense lncRNA gene RIKEN cDNA 4930549C15 gene
Tssr112997 12 26346731 to 26346743 12 + TSS region transcription start site region 112997
Tssr115898 12 26413998 to 26414013 15 - TSS region transcription start site region 115898
Cpgi4504 12 26414421 to 26415663 1242 CpG island CpG island 4504
Mir6538 12 26414901 to 26415010 109 - miRNA gene microRNA 6538
Tssr115899 12 26415199 to 26415214 15 - TSS region transcription start site region 115899
Tssr115900 12 26415228 to 26415242 14 - TSS region transcription start site region 115900
Tssr115901 12 26415257 to 26415303 46 - TSS region transcription start site region 115901
Gm47799 12 26431153 to 26436819 5666 - pseudogene predicted gene, 47799
D12Mit219 12 26441005 to 26441113 108 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 219
Fcsa7 12 26441005 to 26441113 108 QTL femoral cross-sectional area 7
Rsad2 12 26442746 to 26456452 13706 - protein coding gene radical S-adenosyl methionine domain containing 2
Tssr115902 12 26442857 to 26442870 13 - TSS region transcription start site region 115902
Tssr115903 12 26443189 to 26443200 11 - TSS region transcription start site region 115903
Tssr115904 12 26443206 to 26443224 18 - TSS region transcription start site region 115904
Tssr115905 12 26443511 to 26443522 11 - TSS region transcription start site region 115905
Tssr115906 12 26443639 to 26443642 3 - TSS region transcription start site region 115906
Tssr115907 12 26443694 to 26443701 7 - TSS region transcription start site region 115907
Tssr115908 12 26443734 to 26443745 11 - TSS region transcription start site region 115908
Tssr112998 12 26443741 to 26443753 12 + TSS region transcription start site region 112998
Tssr112999 12 26443788 to 26443818 30 + TSS region transcription start site region 112999
Tssr115909 12 26443820 to 26443829 9 - TSS region transcription start site region 115909
Tssr115910 12 26443872 to 26443883 11 - TSS region transcription start site region 115910
Tssr113000 12 26443912 to 26443919 7 + TSS region transcription start site region 113000
Tssr115911 12 26443922 to 26443931 9 - TSS region transcription start site region 115911
Tssr115912 12 26443936 to 26443945 9 - TSS region transcription start site region 115912
Tssr115913 12 26443971 to 26443980 9 - TSS region transcription start site region 115913
Tssr115914 12 26444023 to 26444028 5 - TSS region transcription start site region 115914
Tssr115915 12 26444052 to 26444071 19 - TSS region transcription start site region 115915
Tssr115916 12 26444109 to 26444112 3 - TSS region transcription start site region 115916
Tssr115917 12 26444155 to 26444162 7 - TSS region transcription start site region 115917
Tssr115918 12 26444174 to 26444177 3 - TSS region transcription start site region 115918
Tssr115919 12 26444201 to 26444208 7 - TSS region transcription start site region 115919
Tssr115920 12 26444228 to 26444240 12 - TSS region transcription start site region 115920
Tssr113001 12 26444386 to 26444406 20 + TSS region transcription start site region 113001
Tssr113002 12 26444410 to 26444430 20 + TSS region transcription start site region 113002
Tssr113003 12 26444485 to 26444518 33 + TSS region transcription start site region 113003
Tssr115921 12 26444533 to 26444616 83 - TSS region transcription start site region 115921
Tssr113004 12 26444545 to 26444569 24 + TSS region transcription start site region 113004
Tssr113005 12 26444571 to 26444578 7 + TSS region transcription start site region 113005
Tssr115922 12 26444629 to 26444641 12 - TSS region transcription start site region 115922
Tssr115923 12 26444712 to 26444734 22 - TSS region transcription start site region 115923
Tssr115924 12 26444783 to 26444794 11 - TSS region transcription start site region 115924
Tssr115925 12 26444798 to 26444809 11 - TSS region transcription start site region 115925
Tssr113006 12 26444934 to 26444945 11 + TSS region transcription start site region 113006
Tssr113007 12 26445018 to 26445035 17 + TSS region transcription start site region 113007
Tssr115926 12 26445147 to 26445160 13 - TSS region transcription start site region 115926
Tssr113008 12 26445186 to 26445203 17 + TSS region transcription start site region 113008
Tssr115927 12 26445191 to 26445201 10 - TSS region transcription start site region 115927
Tssr113009 12 26445204 to 26445218 14 + TSS region transcription start site region 113009
Tssr113010 12 26445354 to 26445408 54 + TSS region transcription start site region 113010
Tssr115928 12 26447172 to 26447196 24 - TSS region transcription start site region 115928
Tssr115929 12 26447202 to 26447210 8 - TSS region transcription start site region 115929
Tssr115930 12 26447478 to 26447495 17 - TSS region transcription start site region 115930
Tssr115931 12 26447516 to 26447527 11 - TSS region transcription start site region 115931
Tssr115932 12 26447923 to 26447943 20 - TSS region transcription start site region 115932
Tssr115933 12 26447947 to 26447958 11 - TSS region transcription start site region 115933
Tssr115934 12 26448154 to 26448175 21 - TSS region transcription start site region 115934
Tssr115935 12 26448200 to 26448225 25 - TSS region transcription start site region 115935
Tssr115936 12 26448375 to 26448389 14 - TSS region transcription start site region 115936
Tssr115937 12 26448573 to 26448586 13 - TSS region transcription start site region 115937
Tssr115938 12 26448611 to 26448644 33 - TSS region transcription start site region 115938
Tssr113011 12 26448658 to 26448677 19 + TSS region transcription start site region 113011
Tssr115939 12 26448667 to 26448681 14 - TSS region transcription start site region 115939
Tssr115940 12 26448682 to 26448713 31 - TSS region transcription start site region 115940
Tssr115941 12 26448716 to 26448742 26 - TSS region transcription start site region 115941
Tssr115942 12 26450537 to 26450549 12 - TSS region transcription start site region 115942
Tssr115943 12 26450579 to 26450658 79 - TSS region transcription start site region 115943
Tssr115944 12 26450675 to 26450684 9 - TSS region transcription start site region 115944
Tssr115945 12 26450715 to 26450778 63 - TSS region transcription start site region 115945
Tssr115946 12 26453722 to 26453733 11 - TSS region transcription start site region 115946
Tssr115947 12 26454048 to 26454160 112 - TSS region transcription start site region 115947
Tssr115948 12 26455206 to 26455224 18 - TSS region transcription start site region 115948