Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:25099951-25409963

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi4502 12 25099582 to 25100066 484 CpG island CpG island 4502
Cpgi4503 12 25100591 to 25101300 709 CpG island CpG island 4503
Tssr115887 12 25101195 to 25101226 31 - TSS region transcription start site region 115887
Gm17746 12 25129174 to 25132274 3100 + lincRNA gene predicted gene, 17746
Gm36287 12 25150915 to 25209377 58462 + lincRNA gene predicted gene, 36287
Gm47705 12 25181768 to 25189630 7862 + lincRNA gene predicted gene, 47705
Gm36496 12 25187505 to 25191001 3496 - lncRNA gene predicted gene, 36496
Tssr115888 12 25189095 to 25189101 6 - TSS region transcription start site region 115888
Tssr115889 12 25189580 to 25189597 17 - TSS region transcription start site region 115889
Tssr115890 12 25189602 to 25189614 12 - TSS region transcription start site region 115890
Tssr115891 12 25189661 to 25189673 12 - TSS region transcription start site region 115891
Gm36441 12 25207602 to 25214605 7003 - lncRNA gene predicted gene, 36441
Tssr115892 12 25241989 to 25242024 35 - TSS region transcription start site region 115892
Tssr112986 12 25254763 to 25254804 41 + TSS region transcription start site region 112986
Tssr112987 12 25254951 to 25254963 12 + TSS region transcription start site region 112987
Tssr115893 12 25272832 to 25272852 20 - TSS region transcription start site region 115893
Gm19340 12 25282595 to 25282939 344 + pseudogene predicted gene, 19340
Tssr112988 12 25285098 to 25285105 7 + TSS region transcription start site region 112988
Gm47713 12 25300071 to 25304613 4542 - lincRNA gene predicted gene, 47713
D12Mit105 12 25302445 to 25302582 137 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 105
Cd4ts5 12 25302445 to 25302582 137 QTL CD4 T cell subset 5
Gm46343 12 25303617 to 25311245 7628 + lncRNA gene predicted gene, 46343
Tssr112989 12 25303753 to 25303758 5 + TSS region transcription start site region 112989
Tssr112990 12 25316186 to 25316198 12 + TSS region transcription start site region 112990
Tssr112991 12 25318137 to 25318148 11 + TSS region transcription start site region 112991
Tssr112992 12 25318150 to 25318163 13 + TSS region transcription start site region 112992
Tssr115894 12 25319984 to 25319992 8 - TSS region transcription start site region 115894
Tssr112993 12 25320802 to 25320811 9 + TSS region transcription start site region 112993
Tssr112994 12 25320812 to 25320824 12 + TSS region transcription start site region 112994
Tssr112995 12 25335325 to 25335338 13 + TSS region transcription start site region 112995
Gm36723 12 25355902 to 25471867 115965 + lincRNA gene predicted gene, 36723
Tssr112996 12 25381959 to 25381972 13 + TSS region transcription start site region 112996
Tssr3813 12 25382014 to 25382023 9 + TSS region transcription start site region 3813
Tssr115895 12 25396859 to 25396860 1 - TSS region transcription start site region 115895