Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:24711549-25084400

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rrm2 12 24708254 to 24714146 5892 + protein coding gene ribonucleotide reductase M2
Tssr112966 12 24713692 to 24713699 7 + TSS region transcription start site region 112966
Tssr112967 12 24713729 to 24713735 6 + TSS region transcription start site region 112967
Gm46316 12 24759488 to 24759746 258 + pseudogene predicted gene, 46316
Gm48895 12 24760225 to 24760618 393 + pseudogene predicted gene, 48895
Gm48896 12 24762341 to 24764936 2595 + lincRNA gene predicted gene, 48896
Tssr115879 12 24767599 to 24767609 10 - TSS region transcription start site region 115879
Gm9318 12 24776246 to 24776683 437 - pseudogene predicted gene 9318
Gm26211 12 24779018 to 24779146 128 + snoRNA gene predicted gene, 26211
Gm48897 12 24779173 to 24779467 294 + pseudogene predicted gene, 48897
2900060N12Rik 12 24796664 to 24831202 34538 - bidirectional promoter lncRNA gene RIKEN cDNA 2900060N12 gene
Cpgi4497 12 24830724 to 24832379 1655 CpG island CpG island 4497
Tssr3811 12 24830892 to 24830914 22 + TSS region transcription start site region 3811
Tssr115880 12 24831123 to 24831136 13 - TSS region transcription start site region 115880
Tssr115881 12 24831300 to 24831323 23 - TSS region transcription start site region 115881
Mboat2 12 24831549 to 24964400 132851 + protein coding gene membrane bound O-acyltransferase domain containing 2
Tssr112968 12 24831569 to 24831578 9 + TSS region transcription start site region 112968
Tssr112969 12 24831583 to 24831658 75 + TSS region transcription start site region 112969
2900021C02Rik 12 24856976 to 24857868 892 unclassified gene RIKEN cDNA 2900021C02 gene
Tssr112970 12 24864150 to 24864154 4 + TSS region transcription start site region 112970
Tssr3812 12 24890915 to 24890919 4 + TSS region transcription start site region 3812
BC023202 12 24960656 to 24964396 3740 unclassified gene cDNA sequence BC023202
Tssr112971 12 24973806 to 24973813 7 + TSS region transcription start site region 112971
Tssr112972 12 24973891 to 24973902 11 + TSS region transcription start site region 112972
Gm36236 12 24974609 to 24975554 945 - bidirectional promoter lncRNA gene predicted gene, 36236
Cpgi4498 12 24974741 to 24975462 721 CpG island CpG island 4498
Tssr112973 12 24974914 to 24974948 34 + TSS region transcription start site region 112973
Kidins220 12 24974925 to 25063152 88227 + protein coding gene kinase D-interacting substrate 220
Tssr112974 12 24982269 to 24982286 17 + TSS region transcription start site region 112974
Tssr112975 12 24989757 to 24989769 12 + TSS region transcription start site region 112975
Tssr115882 12 25002878 to 25002882 4 - TSS region transcription start site region 115882
Tssr112976 12 25038355 to 25038380 25 + TSS region transcription start site region 112976
Tssr112977 12 25040095 to 25040102 7 + TSS region transcription start site region 112977
Tssr112978 12 25042662 to 25042666 4 + TSS region transcription start site region 112978
2900003A17Rik 12 25061783 to 25062313 530 unclassified gene RIKEN cDNA 2900003A17 gene
Gm47701 12 25064692 to 25067478 2786 + lincRNA gene predicted gene, 47701