Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:24677341-24849936

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cys1 12 24665833 to 24681813 15980 - protein coding gene cystin 1
Gm36129 12 24679276 to 24700973 21697 + lncRNA gene predicted gene, 36129
Tssr112958 12 24679780 to 24679790 10 + TSS region transcription start site region 112958
Cpgi4494 12 24680509 to 24681342 833 CpG island CpG island 4494
Tssr115875 12 24680890 to 24680943 53 - TSS region transcription start site region 115875
Tssr115876 12 24681776 to 24681812 36 - TSS region transcription start site region 115876
Tssr115877 12 24681826 to 24681844 18 - TSS region transcription start site region 115877
Tssr115878 12 24681853 to 24681854 1 - TSS region transcription start site region 115878
Tssr112959 12 24681925 to 24681936 11 + TSS region transcription start site region 112959
Tssr112960 12 24682696 to 24682700 4 + TSS region transcription start site region 112960
Cpgi4495 12 24706760 to 24707004 244 CpG island CpG island 4495
Tssr112961 12 24707811 to 24707824 13 + TSS region transcription start site region 112961
Cpgi4496 12 24707837 to 24709026 1189 CpG island CpG island 4496
Rrm2 12 24708254 to 24714146 5892 + protein coding gene ribonucleotide reductase M2
Tssr112962 12 24708274 to 24708292 18 + TSS region transcription start site region 112962
Tssr112963 12 24708552 to 24708565 13 + TSS region transcription start site region 112963
Tssr112964 12 24708725 to 24708771 46 + TSS region transcription start site region 112964
Tssr112965 12 24708984 to 24709004 20 + TSS region transcription start site region 112965
Tssr112966 12 24713692 to 24713699 7 + TSS region transcription start site region 112966
Tssr112967 12 24713729 to 24713735 6 + TSS region transcription start site region 112967
Gm46316 12 24759488 to 24759746 258 + pseudogene predicted gene, 46316
Gm48895 12 24760225 to 24760618 393 + pseudogene predicted gene, 48895
Gm48896 12 24762341 to 24764936 2595 + lincRNA gene predicted gene, 48896
Tssr115879 12 24767599 to 24767609 10 - TSS region transcription start site region 115879
Gm9318 12 24776246 to 24776683 437 - pseudogene predicted gene 9318
Gm26211 12 24779018 to 24779146 128 + snoRNA gene predicted gene, 26211
Gm48897 12 24779173 to 24779467 294 + pseudogene predicted gene, 48897
2900060N12Rik 12 24796664 to 24831202 34538 - bidirectional promoter lncRNA gene RIKEN cDNA 2900060N12 gene
Cpgi4497 12 24830724 to 24832379 1655 CpG island CpG island 4497
Tssr3811 12 24830892 to 24830914 22 + TSS region transcription start site region 3811
Tssr115880 12 24831123 to 24831136 13 - TSS region transcription start site region 115880
Tssr115881 12 24831300 to 24831323 23 - TSS region transcription start site region 115881
Mboat2 12 24831549 to 24964400 132851 + protein coding gene membrane bound O-acyltransferase domain containing 2
Tssr112968 12 24831569 to 24831578 9 + TSS region transcription start site region 112968
Tssr112969 12 24831583 to 24831658 75 + TSS region transcription start site region 112969