Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:24516371-24797782

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Taf1b 12 24498581 to 24558571 59990 + protein coding gene TATA-box binding protein associated factor, RNA polymerase I, B
Cpgi4491 12 24571713 to 24572783 1070 CpG island CpG island 4491
Tssr112947 12 24572249 to 24572266 17 + TSS region transcription start site region 112947
Tssr112948 12 24572276 to 24572308 32 + TSS region transcription start site region 112948
Grhl1 12 24572283 to 24617391 45108 + protein coding gene grainyhead like transcription factor 1
Tssr112949 12 24572311 to 24572325 14 + TSS region transcription start site region 112949
Tssr112950 12 24572400 to 24572429 29 + TSS region transcription start site region 112950
Tssr112951 12 24572433 to 24572458 25 + TSS region transcription start site region 112951
Tssr112952 12 24572578 to 24572589 11 + TSS region transcription start site region 112952
Tssr112953 12 24572621 to 24572633 12 + TSS region transcription start site region 112953
Tssr112954 12 24575826 to 24575829 3 + TSS region transcription start site region 112954
Tssr112955 12 24581499 to 24581529 30 + TSS region transcription start site region 112955
Cpgi4492 12 24593154 to 24593408 254 CpG island CpG island 4492
Gm6969 12 24638669 to 24639010 341 - pseudogene predicted pseudogene 6969
Tssr115873 12 24639033 to 24639072 39 - TSS region transcription start site region 115873
Cpgi4493 12 24650764 to 24652332 1568 CpG island CpG island 4493
Tssr115874 12 24651055 to 24651097 42 - TSS region transcription start site region 115874
Tssr112956 12 24651346 to 24651409 63 + TSS region transcription start site region 112956
Klf11 12 24651371 to 24662782 11411 + protein coding gene Kruppel-like factor 11
Tssr112957 12 24651421 to 24651432 11 + TSS region transcription start site region 112957
Cys1 12 24665833 to 24681813 15980 - protein coding gene cystin 1
Eae16 12 24673159 to 24673302 143 QTL experimental allergic encephalomyelitis susceptibility 16
D12Mit12 12 24673159 to 24673302 143 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 12
Gm36129 12 24679276 to 24700973 21697 + lncRNA gene predicted gene, 36129
Tssr112958 12 24679780 to 24679790 10 + TSS region transcription start site region 112958
Cpgi4494 12 24680509 to 24681342 833 CpG island CpG island 4494
Tssr115875 12 24680890 to 24680943 53 - TSS region transcription start site region 115875
Tssr115876 12 24681776 to 24681812 36 - TSS region transcription start site region 115876
Tssr115877 12 24681826 to 24681844 18 - TSS region transcription start site region 115877
Tssr115878 12 24681853 to 24681854 1 - TSS region transcription start site region 115878
Tssr112959 12 24681925 to 24681936 11 + TSS region transcription start site region 112959
Tssr112960 12 24682696 to 24682700 4 + TSS region transcription start site region 112960
Cpgi4495 12 24706760 to 24707004 244 CpG island CpG island 4495
Tssr112961 12 24707811 to 24707824 13 + TSS region transcription start site region 112961
Cpgi4496 12 24707837 to 24709026 1189 CpG island CpG island 4496
Rrm2 12 24708254 to 24714146 5892 + protein coding gene ribonucleotide reductase M2
Tssr112962 12 24708274 to 24708292 18 + TSS region transcription start site region 112962
Tssr112963 12 24708552 to 24708565 13 + TSS region transcription start site region 112963
Tssr112964 12 24708725 to 24708771 46 + TSS region transcription start site region 112964
Tssr112965 12 24708984 to 24709004 20 + TSS region transcription start site region 112965
Tssr112966 12 24713692 to 24713699 7 + TSS region transcription start site region 112966
Tssr112967 12 24713729 to 24713735 6 + TSS region transcription start site region 112967
Gm46316 12 24759488 to 24759746 258 + pseudogene predicted gene, 46316
Gm48895 12 24760225 to 24760618 393 + pseudogene predicted gene, 48895
Gm48896 12 24762341 to 24764936 2595 + lincRNA gene predicted gene, 48896
Tssr115879 12 24767599 to 24767609 10 - TSS region transcription start site region 115879
Gm9318 12 24776246 to 24776683 437 - pseudogene predicted gene 9318
Gm26211 12 24779018 to 24779146 128 + snoRNA gene predicted gene, 26211
Gm48897 12 24779173 to 24779467 294 + pseudogene predicted gene, 48897
2900060N12Rik 12 24796664 to 24831202 34538 - bidirectional promoter lncRNA gene RIKEN cDNA 2900060N12 gene