Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:23261367-24534300

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D12Mit10b 12 23263851 to 23263965 114 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 10b
Gm20472 12 23276362 to 23315393 39031 - pseudogene predicted gene 20472
Gm20473 12 23338309 to 23338420 111 - pseudogene predicted gene 20473
Gm9285 12 23361795 to 23367424 5629 - pseudogene predicted gene 9285
Gm40862 12 23396445 to 23634845 238400 - protein coding gene predicted gene, 40862
Gm47393 12 23426757 to 23426883 126 - pseudogene predicted gene, 47393
Gm47420 12 23435217 to 23435328 111 - pseudogene predicted gene, 47420
Gm47421 12 23465695 to 23465964 269 + pseudogene predicted gene, 47421
Gm9286 12 23479394 to 23484992 5598 - pseudogene predicted gene 9286
Gm47422 12 23503175 to 23503294 119 - pseudogene predicted gene, 47422
Gm20474 12 23526491 to 23573981 47490 - pseudogene predicted gene 20474
Gm49386 12 23634350 to 23634475 125 - pseudogene predicted gene, 49386
Gm9305 12 23711590 to 23714509 2919 - pseudogene predicted gene 9305
Gm9309 12 23733516 to 23736408 2892 - pseudogene predicted gene 9309
Gm10330 12 23778912 to 23780265 1353 - protein coding gene predicted gene 10330
Gm38699 12 23780857 to 23784131 3274 - protein coding gene predicted gene, 38699
Gm47437 12 23800521 to 23800646 125 - pseudogene predicted gene, 47437
Gm47440 12 23812883 to 23812987 104 - pseudogene predicted gene, 47440
Gm46315 12 23835426 to 23838842 3416 + pseudogene predicted gene, 46315
Gm40870 12 23879553 to 23886414 6861 - lncRNA gene predicted gene, 40870
Gm46342 12 23896367 to 23899300 2933 + lincRNA gene predicted gene, 46342
Tssr112943 12 23903123 to 23903136 13 + TSS region transcription start site region 112943
Tssr112944 12 23903145 to 23903187 42 + TSS region transcription start site region 112944
Gm47441 12 23903253 to 23903369 116 + pseudogene predicted gene, 47441
Gm47442 12 23937396 to 23937503 107 + pseudogene predicted gene, 47442
Gm47443 12 23941284 to 23941384 100 - pseudogene predicted gene, 47443
Gm17330 12 23968681 to 23968845 164 - protein coding gene predicted gene, 17330
Gm47444 12 23977124 to 23977228 104 - pseudogene predicted gene, 47444
Gm5954 12 24013354 to 24016997 3643 - protein coding gene predicted gene 5954
9030624G23Rik 12 24043202 to 24097246 54044 - protein coding gene RIKEN cDNA 9030624G23 gene
Cpgi4487 12 24097016 to 24097569 553 CpG island CpG island 4487
Gm47446 12 24176380 to 24179269 2889 - pseudogene predicted gene, 47446
Gm21297 12 24252056 to 24252181 125 - protein coding gene predicted gene, 21297
Cpgi4488 12 24252079 to 24252701 622 CpG island CpG island 4488
Gm4120 12 24302807 to 24308251 5444 - pseudogene predicted gene 4120
D12Mit282b 12 24302960 to 24303082 122 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 282b
Gm47478 12 24367361 to 24367480 119 - pseudogene predicted gene, 47478
Gm9315 12 24382254 to 24383161 907 - pseudogene predicted gene 9315
4930431C11Rik 12 24424838 to 24428122 3284 unclassified gene RIKEN cDNA 4930431C11 gene
Gm16372 12 24493207 to 24493656 449 - pseudogene predicted pseudogene 16372
Cpgi4489 12 24493221 to 24493796 575 CpG island CpG island 4489
Tssr115871 12 24493451 to 24493482 31 - TSS region transcription start site region 115871
Tssr115872 12 24493696 to 24493738 42 - TSS region transcription start site region 115872
Cpgi4490 12 24498490 to 24498912 422 CpG island CpG island 4490
Tssr112945 12 24498570 to 24498587 17 + TSS region transcription start site region 112945
Taf1b 12 24498581 to 24558571 59990 + protein coding gene TATA-box binding protein associated factor, RNA polymerase I, B
Tssr112946 12 24498591 to 24498617 26 + TSS region transcription start site region 112946
Gm47482 12 24512674 to 24512839 165 - pseudogene predicted gene, 47482