Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:23212396-24662503

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68 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm9291 12 23249274 to 23255551 6277 - pseudogene predicted pseudogene 9291
D12Mit10b 12 23263851 to 23263965 114 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 10b
Gm20472 12 23276362 to 23315393 39031 - pseudogene predicted gene 20472
Gm20473 12 23338309 to 23338420 111 - pseudogene predicted gene 20473
Gm9285 12 23361795 to 23367424 5629 - pseudogene predicted gene 9285
Gm40862 12 23396445 to 23634845 238400 - protein coding gene predicted gene, 40862
Gm47393 12 23426757 to 23426883 126 - pseudogene predicted gene, 47393
Gm47420 12 23435217 to 23435328 111 - pseudogene predicted gene, 47420
Gm47421 12 23465695 to 23465964 269 + pseudogene predicted gene, 47421
Gm9286 12 23479394 to 23484992 5598 - pseudogene predicted gene 9286
Gm47422 12 23503175 to 23503294 119 - pseudogene predicted gene, 47422
Gm20474 12 23526491 to 23573981 47490 - pseudogene predicted gene 20474
Gm49386 12 23634350 to 23634475 125 - pseudogene predicted gene, 49386
Gm9305 12 23711590 to 23714509 2919 - pseudogene predicted gene 9305
Gm9309 12 23733516 to 23736408 2892 - pseudogene predicted gene 9309
Gm10330 12 23778912 to 23780265 1353 - protein coding gene predicted gene 10330
Gm38699 12 23780857 to 23784131 3274 - protein coding gene predicted gene, 38699
Gm47437 12 23800521 to 23800646 125 - pseudogene predicted gene, 47437
Gm47440 12 23812883 to 23812987 104 - pseudogene predicted gene, 47440
Gm46315 12 23835426 to 23838842 3416 + pseudogene predicted gene, 46315
Gm40870 12 23879553 to 23886414 6861 - lncRNA gene predicted gene, 40870
Gm46342 12 23896367 to 23899300 2933 + lincRNA gene predicted gene, 46342
Tssr112943 12 23903123 to 23903136 13 + TSS region transcription start site region 112943
Tssr112944 12 23903145 to 23903187 42 + TSS region transcription start site region 112944
Gm47441 12 23903253 to 23903369 116 + pseudogene predicted gene, 47441
Gm47442 12 23937396 to 23937503 107 + pseudogene predicted gene, 47442
Gm47443 12 23941284 to 23941384 100 - pseudogene predicted gene, 47443
Gm17330 12 23968681 to 23968845 164 - protein coding gene predicted gene, 17330
Gm47444 12 23977124 to 23977228 104 - pseudogene predicted gene, 47444
Gm5954 12 24013354 to 24016997 3643 - protein coding gene predicted gene 5954
9030624G23Rik 12 24043202 to 24097246 54044 - protein coding gene RIKEN cDNA 9030624G23 gene
Cpgi4487 12 24097016 to 24097569 553 CpG island CpG island 4487
Gm47446 12 24176380 to 24179269 2889 - pseudogene predicted gene, 47446
Gm21297 12 24252056 to 24252181 125 - protein coding gene predicted gene, 21297
Cpgi4488 12 24252079 to 24252701 622 CpG island CpG island 4488
Gm4120 12 24302807 to 24308251 5444 - pseudogene predicted gene 4120
D12Mit282b 12 24302960 to 24303082 122 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 282b
Gm47478 12 24367361 to 24367480 119 - pseudogene predicted gene, 47478
Gm9315 12 24382254 to 24383161 907 - pseudogene predicted gene 9315
4930431C11Rik 12 24424838 to 24428122 3284 unclassified gene RIKEN cDNA 4930431C11 gene
Gm16372 12 24493207 to 24493656 449 - pseudogene predicted pseudogene 16372
Cpgi4489 12 24493221 to 24493796 575 CpG island CpG island 4489
Tssr115871 12 24493451 to 24493482 31 - TSS region transcription start site region 115871
Tssr115872 12 24493696 to 24493738 42 - TSS region transcription start site region 115872
Cpgi4490 12 24498490 to 24498912 422 CpG island CpG island 4490
Tssr112945 12 24498570 to 24498587 17 + TSS region transcription start site region 112945
Taf1b 12 24498581 to 24558571 59990 + protein coding gene TATA-box binding protein associated factor, RNA polymerase I, B
Tssr112946 12 24498591 to 24498617 26 + TSS region transcription start site region 112946
Gm47482 12 24512674 to 24512839 165 - pseudogene predicted gene, 47482
Cpgi4491 12 24571713 to 24572783 1070 CpG island CpG island 4491
Tssr112947 12 24572249 to 24572266 17 + TSS region transcription start site region 112947
Tssr112948 12 24572276 to 24572308 32 + TSS region transcription start site region 112948
Grhl1 12 24572283 to 24617391 45108 + protein coding gene grainyhead like transcription factor 1
Tssr112949 12 24572311 to 24572325 14 + TSS region transcription start site region 112949
Tssr112950 12 24572400 to 24572429 29 + TSS region transcription start site region 112950
Tssr112951 12 24572433 to 24572458 25 + TSS region transcription start site region 112951
Tssr112952 12 24572578 to 24572589 11 + TSS region transcription start site region 112952
Tssr112953 12 24572621 to 24572633 12 + TSS region transcription start site region 112953
Tssr112954 12 24575826 to 24575829 3 + TSS region transcription start site region 112954
Tssr112955 12 24581499 to 24581529 30 + TSS region transcription start site region 112955
Cpgi4492 12 24593154 to 24593408 254 CpG island CpG island 4492
Gm6969 12 24638669 to 24639010 341 - pseudogene predicted pseudogene 6969
Tssr115873 12 24639033 to 24639072 39 - TSS region transcription start site region 115873
Cpgi4493 12 24650764 to 24652332 1568 CpG island CpG island 4493
Tssr115874 12 24651055 to 24651097 42 - TSS region transcription start site region 115874
Tssr112956 12 24651346 to 24651409 63 + TSS region transcription start site region 112956
Klf11 12 24651371 to 24662782 11411 + protein coding gene Kruppel-like factor 11
Tssr112957 12 24651421 to 24651432 11 + TSS region transcription start site region 112957