Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:21683133-23503240

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77 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
6030426L16Rik 12 21726822 to 21784557 57735 - unclassified gene RIKEN cDNA 6030426L16 gene
Gm46305 12 21758065 to 21759088 1023 - pseudogene predicted gene, 46305
Mrto4-ps2 12 21776159 to 21776707 548 - pseudogene mRNA turnover 4, pseudogene 2
Cpgi4480 12 21778277 to 21779272 995 CpG island CpG island 4480
Cpgi4481 12 21784286 to 21784803 517 CpG island CpG island 4481
Gm30195 12 21880203 to 21881100 897 - pseudogene predicted gene, 30195
Gm40857 12 21881923 to 21883606 1683 - lncRNA gene predicted gene, 40857
Cpgi4482 12 21899005 to 21899512 507 CpG island CpG island 4482
Gm9282 12 21954218 to 22030895 76677 - pseudogene predicted gene 9282
Gm40856 12 21994403 to 21996082 1679 - lncRNA gene predicted gene, 40856
Cpgi4483 12 22030348 to 22031136 788 CpG island CpG island 4483
Gm22908 12 22040913 to 22041022 109 + miRNA gene predicted gene, 22908
Gm9283 12 22090318 to 22096568 6250 - pseudogene predicted pseudogene 9283
D12Mit10a 12 22104848 to 22104978 130 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 10a
Gm4425 12 22115756 to 22156646 40890 - lincRNA gene predicted gene 4425
Gm9289 12 22203105 to 22208643 5538 - pseudogene predicted gene 9289
Gm4101 12 22244016 to 22252733 8717 - lncRNA gene predicted gene 4101
Gm20486 12 22274385 to 22274512 127 - pseudogene predicted gene 20486
Gm6838 12 22320382 to 22326042 5660 - pseudogene predicted gene 6838
Gm49248 12 22409487 to 22414924 5437 - pseudogene predicted gene, 49248
Gm10476 12 22414375 to 22467255 52880 - protein coding gene predicted gene 10476
Gm46340 12 22447150 to 22448347 1197 - protein coding gene predicted gene, 46340
Gm49251 12 22466586 to 22466718 132 - pseudogene predicted gene, 49251
Gm47997 12 22516453 to 22517317 864 - lincRNA gene predicted gene, 47997
Gm40865 12 22535833 to 22542225 6392 - lncRNA gene predicted gene, 40865
Gm48012 12 22552169 to 22555800 3631 + pseudogene predicted gene, 48012
Gm48016 12 22559021 to 22559201 180 + pseudogene predicted gene, 48016
Gm49377 12 22584129 to 22587635 3506 - pseudogene predicted gene, 49377
Gm40864 12 22585889 to 22623345 37456 - unclassified non-coding RNA gene predicted gene, 40864
Gm48019 12 22593133 to 22593240 107 + pseudogene predicted gene, 48019
Gm46341 12 22595203 to 22597810 2607 - lncRNA gene predicted gene, 46341
Gm48020 12 22597021 to 22597125 104 - pseudogene predicted gene, 48020
Gm17391 12 22622962 to 22623087 125 - pseudogene predicted gene, 17391
Gm48030 12 22631358 to 22631462 104 - pseudogene predicted gene, 48030
Gm48031 12 22666701 to 22666844 143 + pseudogene predicted gene, 48031
Gm48032 12 22667528 to 22667632 104 - pseudogene predicted gene, 48032
Gm48033 12 22670762 to 22671136 374 - pseudogene predicted gene, 48033
Gm21941 12 22696934 to 22698887 1953 - protein coding gene predicted gene, 21941
Gm38538 12 22723595 to 22745734 22139 - pseudogene predicted gene, 38538
Gm48035 12 22725142 to 22726590 1448 - pseudogene predicted gene, 48035
Cpgi4486 12 22745213 to 22746022 809 CpG island CpG island 4486
Gm48037 12 22745288 to 22745411 123 - pseudogene predicted gene, 48037
Gm20336 12 22829733 to 22833361 3628 - pseudogene predicted gene, 20336
Gm20327 12 22863943 to 22871682 7739 - pseudogene predicted gene, 20327
Gm48039 12 22877247 to 22877354 107 + pseudogene predicted gene, 48039
Gm48041 12 22882223 to 22882342 119 - pseudogene predicted gene, 48041
Gm48042 12 22906038 to 22906163 125 - pseudogene predicted gene, 48042
Cpgi4485 12 22906144 to 22906694 550 CpG island CpG island 4485
Gm48043 12 22914570 to 22914674 104 - pseudogene predicted gene, 48043
Gm49686 12 22953995 to 22960306 6311 - pseudogene predicted gene, 49686
2410018L13Rik 12 22953997 to 23010243 56246 - lincRNA gene RIKEN cDNA 2410018L13 gene
D12Mit282a 12 22954894 to 22955038 144 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 282a
Gm48044 12 22998355 to 22998468 113 + pseudogene predicted gene, 48044
Gm48046 12 23009845 to 23009967 122 - pseudogene predicted gene, 48046
Tssr115870 12 23010216 to 23010232 16 - TSS region transcription start site region 115870
Gm48064 12 23018708 to 23018812 104 - pseudogene predicted gene, 48064
Gm46310 12 23054129 to 23057545 3416 + protein coding gene predicted gene, 46310
Gm9293 12 23090034 to 23092498 2464 - lncRNA gene predicted gene 9293
Gm9292 12 23112535 to 23115584 3049 - pseudogene predicted gene 9292
Gm47383 12 23155957 to 23156064 107 + pseudogene predicted gene, 47383
Tssr112942 12 23163421 to 23163433 12 + TSS region transcription start site region 112942
Gm47384 12 23166335 to 23166454 119 - pseudogene predicted gene, 47384
Cpgi4484 12 23189167 to 23189941 774 CpG island CpG island 4484
Gm47385 12 23189273 to 23189398 125 - pseudogene predicted gene, 47385
Gm47386 12 23197376 to 23197495 119 - pseudogene predicted gene, 47386
Gm26140 12 23199780 to 23199889 109 + miRNA gene predicted gene, 26140
Gm9291 12 23249274 to 23255551 6277 - pseudogene predicted pseudogene 9291
D12Mit10b 12 23263851 to 23263965 114 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 10b
Gm20472 12 23276362 to 23315393 39031 - pseudogene predicted gene 20472
Gm20473 12 23338309 to 23338420 111 - pseudogene predicted gene 20473
Gm9285 12 23361795 to 23367424 5629 - pseudogene predicted gene 9285
Gm40862 12 23396445 to 23634845 238400 - protein coding gene predicted gene, 40862
Gm47393 12 23426757 to 23426883 126 - pseudogene predicted gene, 47393
Gm47420 12 23435217 to 23435328 111 - pseudogene predicted gene, 47420
Gm47421 12 23465695 to 23465964 269 + pseudogene predicted gene, 47421
Gm9286 12 23479394 to 23484992 5598 - pseudogene predicted gene 9286
Gm47422 12 23503175 to 23503294 119 - pseudogene predicted gene, 47422