Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:21451159-22101707

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr115869 12 21481719 to 21481727 8 - TSS region transcription start site region 115869
Tssr3810 12 21496468 to 21496477 9 + TSS region transcription start site region 3810
Tssr112938 12 21496513 to 21496519 6 + TSS region transcription start site region 112938
Gm31676 12 21542681 to 21543562 881 - lncRNA gene predicted gene, 31676
Cpgi4479 12 21543164 to 21543627 463 CpG island CpG island 4479
Tssr112939 12 21543275 to 21543281 6 + TSS region transcription start site region 112939
Tssr112940 12 21543284 to 21543315 31 + TSS region transcription start site region 112940
Gm19196 12 21545309 to 21554475 9166 + pseudogene predicted gene, 19196
Gm46314 12 21579341 to 21580679 1338 - pseudogene predicted gene, 46314
Tssr112941 12 21587203 to 21587211 8 + TSS region transcription start site region 112941
Gm18241 12 21600087 to 21603865 3778 - pseudogene predicted gene, 18241
Gm31624 12 21601121 to 21623215 22094 + lncRNA gene predicted gene, 31624
Gm4036 12 21624760 to 21630450 5690 - pseudogene predicted gene 4036
6030426L16Rik 12 21726822 to 21784557 57735 - unclassified gene RIKEN cDNA 6030426L16 gene
Gm46305 12 21758065 to 21759088 1023 - pseudogene predicted gene, 46305
Mrto4-ps2 12 21776159 to 21776707 548 - pseudogene mRNA turnover 4, pseudogene 2
Cpgi4480 12 21778277 to 21779272 995 CpG island CpG island 4480
Cpgi4481 12 21784286 to 21784803 517 CpG island CpG island 4481
Gm30195 12 21880203 to 21881100 897 - pseudogene predicted gene, 30195
Gm40857 12 21881923 to 21883606 1683 - lncRNA gene predicted gene, 40857
Cpgi4482 12 21899005 to 21899512 507 CpG island CpG island 4482
Gm9282 12 21954218 to 22030895 76677 - pseudogene predicted gene 9282
Gm40856 12 21994403 to 21996082 1679 - lncRNA gene predicted gene, 40856
Cpgi4483 12 22030348 to 22031136 788 CpG island CpG island 4483
Gm22908 12 22040913 to 22041022 109 + miRNA gene predicted gene, 22908
Gm9283 12 22090318 to 22096568 6250 - pseudogene predicted pseudogene 9283