Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:21382203-21792211

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr115861 12 21384472 to 21384497 25 - TSS region transcription start site region 115861
Tssr115862 12 21389570 to 21389574 4 - TSS region transcription start site region 115862
Ywhaq 12 21390329 to 21417436 27107 - protein coding gene tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta
F630048H11Rik 12 21398603 to 21409360 10757 - unclassified gene RIKEN cDNA F630048H11 gene
Cpgi4478 12 21417102 to 21418072 970 CpG island CpG island 4478
Tssr115863 12 21417138 to 21417163 25 - TSS region transcription start site region 115863
Tssr112934 12 21417195 to 21417210 15 + TSS region transcription start site region 112934
Tssr115864 12 21417219 to 21417270 51 - TSS region transcription start site region 115864
Tssr112935 12 21417269 to 21417280 11 + TSS region transcription start site region 112935
Tssr115865 12 21417345 to 21417355 10 - TSS region transcription start site region 115865
Tssr115866 12 21417356 to 21417377 21 - TSS region transcription start site region 115866
Tssr115867 12 21417526 to 21417587 61 - TSS region transcription start site region 115867
Tssr115868 12 21417591 to 21417605 14 - TSS region transcription start site region 115868
Gm4419 12 21417707 to 21421064 3357 + antisense lncRNA gene predicted gene 4419
Tssr112936 12 21417872 to 21417887 15 + TSS region transcription start site region 112936
Tssr112937 12 21443276 to 21443278 2 + TSS region transcription start site region 112937
Tssr115869 12 21481719 to 21481727 8 - TSS region transcription start site region 115869
Tssr3810 12 21496468 to 21496477 9 + TSS region transcription start site region 3810
Tssr112938 12 21496513 to 21496519 6 + TSS region transcription start site region 112938
Gm31676 12 21542681 to 21543562 881 - lncRNA gene predicted gene, 31676
Cpgi4479 12 21543164 to 21543627 463 CpG island CpG island 4479
Tssr112939 12 21543275 to 21543281 6 + TSS region transcription start site region 112939
Tssr112940 12 21543284 to 21543315 31 + TSS region transcription start site region 112940
Gm19196 12 21545309 to 21554475 9166 + pseudogene predicted gene, 19196
Gm46314 12 21579341 to 21580679 1338 - pseudogene predicted gene, 46314
Tssr112941 12 21587203 to 21587211 8 + TSS region transcription start site region 112941
Gm18241 12 21600087 to 21603865 3778 - pseudogene predicted gene, 18241
Gm31624 12 21601121 to 21623215 22094 + lncRNA gene predicted gene, 31624
Gm4036 12 21624760 to 21630450 5690 - pseudogene predicted gene 4036
6030426L16Rik 12 21726822 to 21784557 57735 - unclassified gene RIKEN cDNA 6030426L16 gene
Gm46305 12 21758065 to 21759088 1023 - pseudogene predicted gene, 46305
Mrto4-ps2 12 21776159 to 21776707 548 - pseudogene mRNA turnover 4, pseudogene 2
Cpgi4480 12 21778277 to 21779272 995 CpG island CpG island 4480
Cpgi4481 12 21784286 to 21784803 517 CpG island CpG island 4481