MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 12:20830624-21150923

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm6626	12	20766349 to 20924161	157812	+	lncRNA gene	predicted gene 6626
Cpgi4471	12	20845277 to 20845434	157		CpG island	CpG island 4471
3110053B16Rik	12	20874125 to 20921262	47137	-	pseudogene	RIKEN cDNA 3110053B16 gene
Zfp125	12	20877084 to 20921262	44178	-	protein coding gene	zinc finger protein 125
Gm10478	12	20896239 to 20896638	399	-	pseudogene	predicted gene 10478
Cpgi4472	12	20920766 to 20921524	758		CpG island	CpG island 4472
Tssr115849	12	20921045 to 20921083	38	-	TSS region	transcription start site region 115849
Tssr115850	12	20921218 to 20921236	18	-	TSS region	transcription start site region 115850
Tssr115851	12	20921255 to 20921273	18	-	TSS region	transcription start site region 115851
Gm30124	12	20987540 to 21015726	28186	+	lincRNA gene	predicted gene, 30124
Gm21989	12	20990538 to 21013056	22518	+	unclassified non-coding RNA gene	predicted gene 21989
Cpgi4473	12	20990624 to 20990923	299		CpG island	CpG island 4473
Gm46306	12	21015817 to 21016648	831	+	protein coding gene	predicted gene, 46306
B230354O11Rik	12	21037170 to 21040420	3250		unclassified gene	RIKEN cDNA B230354O11 gene
Gm5977	12	21042959 to 21048327	5368	+	pseudogene	predicted gene 5977
Cpgi4474	12	21111227 to 21112770	1543		CpG island	CpG island 4474
Asap2	12	21111713 to 21270171	158458	+	protein coding gene	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2
Tssr112922	12	21111720 to 21111776	56	+	TSS region	transcription start site region 112922
Tssr112923	12	21111778 to 21111809	31	+	TSS region	transcription start site region 112923