Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:18120821-19381375

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65 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm40850 12 18114420 to 18134437 20017 - lncRNA gene predicted gene, 40850
Gm48347 12 18123716 to 18123840 124 + pseudogene predicted gene, 48347
Cpgi4453 12 18135610 to 18136491 881 CpG island CpG island 4453
Tssr112907 12 18135905 to 18135922 17 + TSS region transcription start site region 112907
Tssr112908 12 18135931 to 18135945 14 + TSS region transcription start site region 112908
Gm9229 12 18136186 to 18136311 125 + protein coding gene predicted gene 9229
Gm48354 12 18143935 to 18144082 147 - pseudogene predicted gene, 48354
Gm48355 12 18186151 to 18191623 5472 + pseudogene predicted gene, 48355
Bnip3l-ps 12 18216542 to 18217673 1131 + pseudogene BCL2/adenovirus E1B interacting protein 3-like, pseudogene
Tssr112909 12 18217169 to 18217218 49 + TSS region transcription start site region 112909
Gm40879 12 18219929 to 18223712 3783 + pseudogene predicted gene, 40879
Gm19368 12 18227160 to 18239074 11914 - pseudogene predicted gene, 19368
Tssr3808 12 18229879 to 18229884 5 + TSS region transcription start site region 3808
Gm46312 12 18285572 to 18286534 962 + pseudogene predicted gene, 46312
Gm7093 12 18332873 to 18339043 6170 + pseudogene predicted gene 7093
Gm9231 12 18364462 to 18365470 1008 + pseudogene predicted gene 9231
Cpgi4454 12 18387214 to 18388076 862 CpG island CpG island 4454
Tssr112910 12 18387485 to 18387496 11 + TSS region transcription start site region 112910
Gm40848 12 18387755 to 18388078 323 + protein coding gene predicted gene, 40848
Cpgi4455 12 18390870 to 18391122 252 CpG island CpG island 4455
Tssr112911 12 18390907 to 18390910 3 + TSS region transcription start site region 112911
Gm48392 12 18505722 to 18505869 147 + pseudogene predicted gene, 48392
Cpgi4456 12 18514162 to 18514935 773 CpG island CpG island 4456
Tssr112912 12 18514465 to 18514486 21 + TSS region transcription start site region 112912
5730507C01Rik 12 18514510 to 18535254 20744 + protein coding gene RIKEN cDNA 5730507C01 gene
Gm19786 12 18559615 to 18565108 5493 + pseudogene predicted gene, 19786
Cpgi4457 12 18609855 to 18610773 918 CpG island CpG island 4457
Tssr112913 12 18610080 to 18610114 34 + TSS region transcription start site region 112913
Tssr112914 12 18610121 to 18610133 12 + TSS region transcription start site region 112914
Gm48398 12 18610384 to 18610600 216 + pseudogene predicted gene, 48398
Gm48409 12 18640932 to 18641025 93 - pseudogene predicted gene, 48409
Gm49760 12 18648214 to 18649998 1784 + pseudogene predicted gene, 49760
Gm9237 12 18681374 to 18684265 2891 + pseudogene predicted pseudogene 9237
Gm48411 12 18725260 to 18725413 153 + pseudogene predicted gene, 48411
Gm48446 12 18730269 to 18730308 39 - pseudogene predicted gene, 48446
Gm9241 12 18735821 to 18766375 30554 + pseudogene predicted gene 9241
Gm46313 12 18773494 to 18776375 2881 + pseudogene predicted gene, 46313
Gm40847 12 18853840 to 18906503 52663 + unclassified non-coding RNA gene predicted gene, 40847
Gm49370 12 18853871 to 18854005 134 + pseudogene predicted gene, 49370
Gm40846 12 18870811 to 18874494 3683 + pseudogene predicted gene, 40846
Gm46338 12 18905926 to 18911358 5432 + lincRNA gene predicted gene, 46338
Gm49764 12 18954199 to 18956598 2399 - lincRNA gene predicted gene, 49764
Gm48472 12 18973135 to 18973288 153 + pseudogene predicted gene, 48472
Gm9249 12 18991483 to 18997102 5619 + pseudogene predicted gene 9249
Gm48516 12 19036258 to 19036408 150 + pseudogene predicted gene, 48516
Gm40849 12 19044706 to 19055179 10473 + pseudogene predicted gene, 40849
Gm9158 12 19096320 to 19099220 2900 + pseudogene predicted gene 9158
Gm48523 12 19166959 to 19167112 153 + pseudogene predicted gene, 48523
Cpgi4458 12 19175660 to 19176379 719 CpG island CpG island 4458
Tssr115845 12 19175713 to 19175731 18 - TSS region transcription start site region 115845
Tssr112915 12 19175849 to 19175854 5 + TSS region transcription start site region 112915
Tssr112916 12 19175884 to 19175926 42 + TSS region transcription start site region 112916
Gm48525 12 19176103 to 19176229 126 + pseudogene predicted gene, 48525
Gm45961 12 19188626 to 19199771 11145 + protein coding gene predicted gene, 45961
Gm48528 12 19218082 to 19218575 493 + pseudogene predicted gene, 48528
Gm40843 12 19243920 to 19248478 4558 + lncRNA gene predicted gene, 40843
Cpgi4459 12 19288292 to 19289248 956 CpG island CpG island 4459
Tssr112917 12 19288478 to 19288524 46 + TSS region transcription start site region 112917
Gm5953 12 19288562 to 19291177 2615 + unclassified gene predicted gene 5953
Gm49957 12 19292813 to 19301264 8451 + lincRNA gene predicted gene, 49957
2610028L16Rik 12 19295295 to 19297447 2152 unclassified gene RIKEN cDNA 2610028L16 gene
Gm48540 12 19295769 to 19295877 108 - pseudogene predicted gene, 48540
Gm46339 12 19302803 to 19305185 2382 + protein coding gene predicted gene, 46339
Gm9255 12 19329058 to 19334616 5558 + pseudogene predicted pseudogene 9255
Gm48576 12 19379230 to 19379377 147 + pseudogene predicted gene, 48576