MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 12:17464706-17624722

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr115839	12	17507201 to 17507212	11	-	TSS region	transcription start site region 115839
Tssr115840	12	17507216 to 17507225	9	-	TSS region	transcription start site region 115840
Tssr112883	12	17542946 to 17542957	11	+	TSS region	transcription start site region 112883
Cpgi4449	12	17544231 to 17545584	1353		CpG island	CpG island 4449
Tssr115841	12	17544586 to 17544605	19	-	TSS region	transcription start site region 115841
Tssr112884	12	17544706 to 17544722	16	+	TSS region	transcription start site region 112884
Tssr112885	12	17544860 to 17544892	32	+	TSS region	transcription start site region 112885
Odc1	12	17544867 to 17551502	6635	+	protein coding gene	ornithine decarboxylase, structural 1
Tssr112886	12	17544894 to 17544951	57	+	TSS region	transcription start site region 112886
Tssr112887	12	17544958 to 17544971	13	+	TSS region	transcription start site region 112887
Gm22748	12	17546146 to 17546281	135	+	snoRNA gene	predicted gene, 22748
D12Nds11	12	17546446 to 17546616	170		DNA segment	DNA segment, Chr 12, Nuffield Department of Surgery 11
Lmblgq5	12	17546446 to 80910109	63363663		QTL	limb length QTL 5
Tssr112888	12	17547692 to 17547714	22	+	TSS region	transcription start site region 112888
Gm36862	12	17556901 to 17565007	8106	+	lncRNA gene	predicted gene, 36862
Tssr112889	12	17557714 to 17557718	4	+	TSS region	transcription start site region 112889
Gm48290	12	17568478 to 17568849	371	-	pseudogene	predicted gene, 48290
Gm48313	12	17603249 to 17607231	3982	-	lincRNA gene	predicted gene, 48313