MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 12:17293458-17485095

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Atp6v1c2	12	17284721 to 17325386	40665	-	protein coding gene	ATPase, H+ transporting, lysosomal V1 subunit C2
Cpgi4447	12	17324160 to 17325229	1069		CpG island	CpG island 4447
Tssr115836	12	17324722 to 17324736	14	-	TSS region	transcription start site region 115836
Tssr115837	12	17329366 to 17329369	3	-	TSS region	transcription start site region 115837
Gm46336	12	17344401 to 17348373	3972	-	bidirectional promoter lncRNA gene	predicted gene, 46336
Cpgi4448	12	17348210 to 17348714	504		CpG island	CpG island 4448
Tssr115838	12	17348373 to 17348419	46	-	TSS region	transcription start site region 115838
Tssr112878	12	17348422 to 17348526	104	+	TSS region	transcription start site region 112878
Nol10	12	17348458 to 17430095	81637	+	protein coding gene	nucleolar protein 10
Tssr112879	12	17354838 to 17354845	7	+	TSS region	transcription start site region 112879
Tssr112880	12	17354871 to 17354892	21	+	TSS region	transcription start site region 112880
Mir3066	12	17355392 to 17355474	82	+	miRNA gene	microRNA 3066
Tssr3805	12	17364943 to 17364945	2	+	TSS region	transcription start site region 3805
Tssr112881	12	17371059 to 17371063	4	+	TSS region	transcription start site region 112881
Tssr112882	12	17372922 to 17372956	34	+	TSS region	transcription start site region 112882
Tssr3806	12	17416359 to 17416362	3	+	TSS region	transcription start site region 3806
Gm36752	12	17436618 to 17445699	9081	+	lincRNA gene	predicted gene, 36752
Gm46325	12	17458324 to 17459317	993	-	lncRNA gene	predicted gene, 46325