Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:17002100-17346888

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
2410004P03Rik 12 17004958 to 17011734 6776 - protein coding gene RIKEN cDNA 2410004P03 gene
Cpgi4444 12 17011424 to 17011754 330 CpG island CpG island 4444
Tssr115832 12 17011512 to 17011561 49 - TSS region transcription start site region 115832
Tssr112874 12 17033708 to 17033715 7 + TSS region transcription start site region 112874
D12Mit58 12 17038020 to 17038137 117 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 58
Gm48538 12 17065413 to 17074550 9137 + lincRNA gene predicted gene, 48538
Kcnf1 12 17172100 to 17176888 4788 - protein coding gene potassium voltage-gated channel, subfamily F, member 1
Cpgi4445 12 17175120 to 17176886 1766 CpG island CpG island 4445
Tssr115833 12 17176544 to 17176557 13 - TSS region transcription start site region 115833
Tssr115834 12 17176574 to 17176587 13 - TSS region transcription start site region 115834
Tssr115835 12 17176954 to 17176965 11 - TSS region transcription start site region 115835
Gm36568 12 17183862 to 17228053 44191 - lncRNA gene predicted gene, 36568
D12Dcr11 12 17218271 to 17218366 95 DNA segment DNA Segment, Chr 12, Derry C. Roopenian 11
Gm10054 12 17233612 to 17234042 430 + pseudogene predicted gene 10054
Cpgi4446 12 17266281 to 17267064 783 CpG island CpG island 4446
Tssr112875 12 17266571 to 17266601 30 + TSS region transcription start site region 112875
Pdia6 12 17266595 to 17284770 18175 + protein coding gene protein disulfide isomerase associated 6
Tssr112876 12 17266609 to 17266618 9 + TSS region transcription start site region 112876
Tssr112877 12 17274448 to 17274465 17 + TSS region transcription start site region 112877
Atp6v1c2 12 17284721 to 17325386 40665 - protein coding gene ATPase, H+ transporting, lysosomal V1 subunit C2
Nbwa1 12 17290133 to 17290301 168 QTL NZB and NZW autoimmunity 1
D12Mit291 12 17290133 to 17290301 168 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 291
Cpgi4447 12 17324160 to 17325229 1069 CpG island CpG island 4447
Tssr115836 12 17324722 to 17324736 14 - TSS region transcription start site region 115836
Tssr115837 12 17329366 to 17329369 3 - TSS region transcription start site region 115837
Gm46336 12 17344401 to 17348373 3972 - bidirectional promoter lncRNA gene predicted gene, 46336