Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:16886512-17136561

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi4442 12 16894068 to 16895741 1673 CpG island CpG island 4442
Tssr115827 12 16894684 to 16894725 41 - TSS region transcription start site region 115827
Tssr112861 12 16894827 to 16894887 60 + TSS region transcription start site region 112861
Tssr112862 12 16894894 to 16894904 10 + TSS region transcription start site region 112862
Rock2 12 16894895 to 16987823 92928 + protein coding gene Rho-associated coiled-coil containing protein kinase 2
Tssr112863 12 16895082 to 16895090 8 + TSS region transcription start site region 112863
Tssr112864 12 16895117 to 16895132 15 + TSS region transcription start site region 112864
Tssr112865 12 16904962 to 16904987 25 + TSS region transcription start site region 112865
Tssr112866 12 16909482 to 16909485 3 + TSS region transcription start site region 112866
Tssr112867 12 16910469 to 16910474 5 + TSS region transcription start site region 112867
Gm48291 12 16921987 to 16922305 318 - pseudogene predicted gene, 48291
Gm22303 12 16939994 to 16940115 121 + snoRNA gene predicted gene, 22303
Tssr112868 12 16942833 to 16942887 54 + TSS region transcription start site region 112868
Tssr112869 12 16958689 to 16958703 14 + TSS region transcription start site region 112869
Tssr112870 12 16965035 to 16965065 30 + TSS region transcription start site region 112870
Tssr112871 12 16965122 to 16965155 33 + TSS region transcription start site region 112871
Tssr112872 12 16965490 to 16965565 75 + TSS region transcription start site region 112872
Tssr112873 12 16966168 to 16966179 11 + TSS region transcription start site region 112873
Pqlc3 12 16988648 to 17000408 11760 - protein coding gene PQ loop repeat containing
Cpgi4443 12 16999636 to 17000513 877 CpG island CpG island 4443
Tssr115828 12 16999964 to 16999977 13 - TSS region transcription start site region 115828
Tssr115829 12 16999991 to 17000071 80 - TSS region transcription start site region 115829
Tssr115830 12 17000108 to 17000122 14 - TSS region transcription start site region 115830
Tssr115831 12 17000330 to 17000354 24 - TSS region transcription start site region 115831
2410004P03Rik 12 17004958 to 17011734 6776 - protein coding gene RIKEN cDNA 2410004P03 gene
Cpgi4444 12 17011424 to 17011754 330 CpG island CpG island 4444
Tssr115832 12 17011512 to 17011561 49 - TSS region transcription start site region 115832
Tssr112874 12 17033708 to 17033715 7 + TSS region transcription start site region 112874
D12Mit58 12 17038020 to 17038137 117 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 58
Gm48538 12 17065413 to 17074550 9137 + lincRNA gene predicted gene, 48538