Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:16043449-16673791

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm18114 12 16155101 to 16155613 512 + pseudogene predicted gene, 18114
Tssr112842 12 16170448 to 16170458 10 + TSS region transcription start site region 112842
Tssr112843 12 16170468 to 16170475 7 + TSS region transcription start site region 112843
Gm48607 12 16185773 to 16206472 20699 + lincRNA gene predicted gene, 48607
Gm36372 12 16204911 to 16221279 16368 - lincRNA gene predicted gene, 36372
Gm48606 12 16207733 to 16286119 78386 + lincRNA gene predicted gene, 48606
Tssr115800 12 16221244 to 16221251 7 - TSS region transcription start site region 115800
Tssr115801 12 16221259 to 16221277 18 - TSS region transcription start site region 115801
Gm48605 12 16229750 to 16232227 2477 - lincRNA gene predicted gene, 48605
Tssr112844 12 16232289 to 16232310 21 + TSS region transcription start site region 112844
D12Lip1 12 16358449 to 16358791 342 DNA segment DNA segment, Chr 12, Lipid Research Laboratory-UCLA 1
D12Lip6 12 16361427 to 16361539 112 DNA segment DNA segment, Chr 12, Lipid Research Laboratory-UCLA 6
D12Mit170 12 16380226 to 16380338 112 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 170
Circp1 12 16380226 to 16380338 112 QTL circadian photosensitivity 1
D12Lip5 12 16492591 to 16492770 179 DNA segment DNA segment, Chr 12, Lipid Research Laboratory-UCLA 5
D12Lip2 12 16503933 to 16504048 115 DNA segment DNA segment, Chr 12, Lipid Research Laboratory-UCLA 2
D12Lip3 12 16503933 to 16504053 120 DNA segment DNA segment, Chr 12, Lipid Research Laboratory-UCLA 3
D12Lip4 12 16503936 to 16504048 112 DNA segment DNA segment, Chr 12, Lipid Research Laboratory-UCLA 4
Tssr112845 12 16532662 to 16532671 9 + TSS region transcription start site region 112845
Tssr3800 12 16532778 to 16532791 13 + TSS region transcription start site region 3800
Lpin1 12 16535669 to 16610966 75297 - protein coding gene lipin 1
Tssr115802 12 16537792 to 16537810 18 - TSS region transcription start site region 115802
Tssr115803 12 16577228 to 16577241 13 - TSS region transcription start site region 115803
Tssr3801 12 16580911 to 16580922 11 - TSS region transcription start site region 3801
Tssr115804 12 16583995 to 16583999 4 - TSS region transcription start site region 115804
Cpgi4438 12 16589381 to 16589885 504 CpG island CpG island 4438
Tssr115805 12 16589723 to 16589735 12 - TSS region transcription start site region 115805
Tssr115806 12 16589743 to 16589826 83 - TSS region transcription start site region 115806
Tssr115807 12 16604131 to 16604143 12 - TSS region transcription start site region 115807
Tssr115808 12 16610960 to 16610991 31 - TSS region transcription start site region 115808
D12Lip7 12 16616565 to 16616746 181 DNA segment DNA segment, Chr 12, Lipid Research Laboratory-UCLA 7
Tssr3802 12 16622370 to 16622373 3 + TSS region transcription start site region 3802
Tssr115809 12 16646957 to 16646975 18 - TSS region transcription start site region 115809
Tssr115810 12 16646991 to 16647002 11 - TSS region transcription start site region 115810
Tssr115811 12 16647007 to 16647019 12 - TSS region transcription start site region 115811
Cpgi4439 12 16653283 to 16654171 888 CpG island CpG island 4439
Ntsr2 12 16653451 to 16660236 6785 + protein coding gene neurotensin receptor 2
Tssr112846 12 16653475 to 16653486 11 + TSS region transcription start site region 112846
Tssr112847 12 16653533 to 16653544 11 + TSS region transcription start site region 112847
Tssr112848 12 16653569 to 16653583 14 + TSS region transcription start site region 112848
Tssr112849 12 16653604 to 16653628 24 + TSS region transcription start site region 112849
Tssr112850 12 16653709 to 16653763 54 + TSS region transcription start site region 112850
Tssr112851 12 16653768 to 16653775 7 + TSS region transcription start site region 112851
Tssr112852 12 16653797 to 16653808 11 + TSS region transcription start site region 112852
Tssr112853 12 16653903 to 16653976 73 + TSS region transcription start site region 112853
Tssr112854 12 16653988 to 16654003 15 + TSS region transcription start site region 112854
Tssr112855 12 16656304 to 16656310 6 + TSS region transcription start site region 112855
Tssr115812 12 16657275 to 16657279 4 - TSS region transcription start site region 115812
Tssr112856 12 16657902 to 16657917 15 + TSS region transcription start site region 112856
Tssr112857 12 16657969 to 16657978 9 + TSS region transcription start site region 112857
Greb1 12 16670615 to 16800886 130271 - protein coding gene gene regulated by estrogen in breast cancer protein
Gm48140 12 16672240 to 16685013 12773 + antisense lncRNA gene predicted gene, 48140
Tssr3803 12 16672275 to 16672303 28 + TSS region transcription start site region 3803