Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:14337442-15869203

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D12Mit82 12 14346848 to 14347013 165 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 82
Gm48498 12 14489404 to 14493244 3840 - pseudogene predicted gene, 48498
Gm9847 12 14494561 to 14495159 598 + pseudogene predicted pseudogene 9847
Gm25414 12 14506587 to 14506693 106 + snRNA gene predicted gene, 25414
Gm48504 12 14653662 to 14658855 5193 + unclassified gene predicted gene, 48504
Gm6053 12 14829534 to 14830123 589 + pseudogene predicted gene 6053
Gm26449 12 14878495 to 14878598 103 + snRNA gene predicted gene, 26449
Cpgi4435 12 14929642 to 14929897 255 CpG island CpG island 4435
Gm9202 12 14930107 to 14930543 436 + pseudogene predicted gene 9202
4930448C13Rik 12 14996389 to 15050389 54000 - lincRNA gene RIKEN cDNA 4930448C13 gene
Tssr3799 12 15010623 to 15010626 3 + TSS region transcription start site region 3799
Gm27682 12 15020535 to 15020644 109 - miRNA gene predicted gene, 27682
Tssr115784 12 15050395 to 15050407 12 - TSS region transcription start site region 115784
Gm3838 12 15050779 to 15051301 522 + pseudogene predicted gene 3838
Tssr115785 12 15051618 to 15051635 17 - TSS region transcription start site region 115785
Gm36128 12 15051695 to 15096192 44497 + lncRNA gene predicted gene, 36128
Gm19084 12 15102442 to 15104203 1761 + pseudogene predicted gene, 19084
Gm40284 12 15129422 to 15137422 8000 + lncRNA gene predicted gene, 40284
Gm48539 12 15278417 to 15301045 22628 - lincRNA gene predicted gene, 48539
D12Mit169 12 15291025 to 15291141 116 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 169
Cplaq10 12 15291025 to 78993590 63702565 QTL circadian period of locomotor activity 10
Gm48541 12 15483043 to 15486670 3627 + pseudogene predicted gene, 48541
Gm17915 12 15581254 to 15581798 544 + pseudogene predicted gene, 17915
Gm40287 12 15606333 to 15726876 120543 + lncRNA gene predicted gene, 40287
Tssr112836 12 15606335 to 15606353 18 + TSS region transcription start site region 112836
Tssr112837 12 15606367 to 15606390 23 + TSS region transcription start site region 112837
Ath6 12 15708612 to 15708755 143 QTL atherosclerosis 6
D12Mit49 12 15708612 to 15708755 143 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 49
Gm4804 12 15728078 to 15729207 1129 + pseudogene predicted gene 4804
Trib2 12 15791727 to 15816922 25195 - protein coding gene tribbles pseudokinase 2
Tssr115786 12 15793169 to 15793173 4 - TSS region transcription start site region 115786
Cpgi4436 12 15793734 to 15793972 238 CpG island CpG island 4436
Mir6387 12 15800994 to 15801101 107 - miRNA gene microRNA 6387
Tssr112838 12 15811341 to 15811348 7 + TSS region transcription start site region 112838
Tssr115787 12 15814739 to 15814752 13 - TSS region transcription start site region 115787
Cpgi4437 12 15814758 to 15817344 2586 CpG island CpG island 4437
Tssr112839 12 15814913 to 15814920 7 + TSS region transcription start site region 112839
Tssr112840 12 15815017 to 15815027 10 + TSS region transcription start site region 112840
Tssr115788 12 15815572 to 15815583 11 - TSS region transcription start site region 115788
Tssr115789 12 15815596 to 15815613 17 - TSS region transcription start site region 115789
Tssr115790 12 15815970 to 15816006 36 - TSS region transcription start site region 115790
Tssr115791 12 15816011 to 15816020 9 - TSS region transcription start site region 115791
Tssr115792 12 15816030 to 15816059 29 - TSS region transcription start site region 115792
Tssr115793 12 15816138 to 15816149 11 - TSS region transcription start site region 115793
Tssr115794 12 15816171 to 15816190 19 - TSS region transcription start site region 115794
Tssr115795 12 15816595 to 15816607 12 - TSS region transcription start site region 115795
Tssr115796 12 15816736 to 15816747 11 - TSS region transcription start site region 115796
Tssr115797 12 15816762 to 15816881 119 - TSS region transcription start site region 115797
Gm5432 12 15817003 to 15888155 71152 + bidirectional promoter lncRNA gene predicted gene 5432
Gm48558 12 15842758 to 15850625 7867 - lincRNA gene predicted gene, 48558
Tssr115798 12 15850610 to 15850630 20 - TSS region transcription start site region 115798
Gm48557 12 15865144 to 15865697 553 - pseudogene predicted gene, 48557
Tssr115799 12 15865729 to 15865732 3 - TSS region transcription start site region 115799