Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:13899404-15083244

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D12Mit1008 12 13937207 to 13937360 153 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 1008
Gm48479 12 14013084 to 14057866 44782 + lincRNA gene predicted gene, 48479
Tssr112835 12 14018650 to 14018652 2 + TSS region transcription start site region 112835
Gm48480 12 14030352 to 14033321 2969 + lincRNA gene predicted gene, 48480
Gm48482 12 14128116 to 14130648 2532 - unclassified gene predicted gene, 48482
Tssr115780 12 14147101 to 14147105 4 - TSS region transcription start site region 115780
Lratd1 12 14147598 to 14152038 4440 - protein coding gene LRAT domain containing 1
Tssr115781 12 14148597 to 14148601 4 - TSS region transcription start site region 115781
Cpgi4433 12 14149490 to 14150885 1395 CpG island CpG island 4433
Cpgi4434 12 14151454 to 14152334 880 CpG island CpG island 4434
Tssr115782 12 14152041 to 14152069 28 - TSS region transcription start site region 115782
Tssr115783 12 14152071 to 14152082 11 - TSS region transcription start site region 115783
Gm36007 12 14234003 to 14256756 22753 + lncRNA gene predicted gene, 36007
Gm16497 12 14261534 to 14285684 24150 + lincRNA gene predicted gene 16497
Gm40840 12 14279418 to 14283646 4228 - lncRNA gene predicted gene, 40840
D12Mit82 12 14346848 to 14347013 165 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 82
Gm48498 12 14489404 to 14493244 3840 - pseudogene predicted gene, 48498
Gm9847 12 14494561 to 14495159 598 + pseudogene predicted pseudogene 9847
Gm25414 12 14506587 to 14506693 106 + snRNA gene predicted gene, 25414
Gm48504 12 14653662 to 14658855 5193 + unclassified gene predicted gene, 48504
Gm6053 12 14829534 to 14830123 589 + pseudogene predicted gene 6053
Gm26449 12 14878495 to 14878598 103 + snRNA gene predicted gene, 26449
Cpgi4435 12 14929642 to 14929897 255 CpG island CpG island 4435
Gm9202 12 14930107 to 14930543 436 + pseudogene predicted gene 9202
4930448C13Rik 12 14996389 to 15050389 54000 - lincRNA gene RIKEN cDNA 4930448C13 gene
Tssr3799 12 15010623 to 15010626 3 + TSS region transcription start site region 3799
Gm27682 12 15020535 to 15020644 109 - miRNA gene predicted gene, 27682
Tssr115784 12 15050395 to 15050407 12 - TSS region transcription start site region 115784
Gm3838 12 15050779 to 15051301 522 + pseudogene predicted gene 3838
Tssr115785 12 15051618 to 15051635 17 - TSS region transcription start site region 115785
Gm36128 12 15051695 to 15096192 44497 + lncRNA gene predicted gene, 36128