MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 12:13560804-14060921

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Nbas	12	13269133 to 13583811	314678	+	protein coding gene	neuroblastoma amplified sequence
Tssr112832	12	13564132 to 13564136	4	+	TSS region	transcription start site region 112832
Tssr3798	12	13566127 to 13566152	25	+	TSS region	transcription start site region 3798
Tssr112833	12	13566155 to 13566168	13	+	TSS region	transcription start site region 112833
Tssr112834	12	13594240 to 13594244	4	+	TSS region	transcription start site region 112834
Gm35725	12	13607789 to 13627646	19857	-	lincRNA gene	predicted gene, 35725
D12Mit216	12	13645140 to 13645248	108		DNA segment	DNA segment, Chr 12, Massachusetts Institute of Technology 216
Gm35890	12	13668853 to 13676084	7231	+	lincRNA gene	predicted gene, 35890
Gm4929	12	13752674 to 13753665	991	-	pseudogene	predicted gene 4929
Gm38668	12	13785160 to 13788542	3382	-	pseudogene	predicted gene, 38668
Gm49374	12	13787903 to 13792337	4434	-	pseudogene	predicted gene, 49374
Gm7126	12	13788557 to 13790252	1695	-	pseudogene	predicted gene 7126
Gm9194	12	13790264 to 13791710	1446	-	pseudogene	predicted gene 9194
D12Mit241	12	13810804 to 13810921	117		DNA segment	DNA Segment, Chr 12, Massachusetts Institute of Technology 241
D12Mit1008	12	13937207 to 13937360	153		DNA segment	DNA segment, Chr 12, Massachusetts Institute of Technology 1008
Gm48479	12	14013084 to 14057866	44782	+	lincRNA gene	predicted gene, 48479
Tssr112835	12	14018650 to 14018652	2	+	TSS region	transcription start site region 112835
Gm48480	12	14030352 to 14033321	2969	+	lincRNA gene	predicted gene, 48480