Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:13518116-14740648

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nbas 12 13269133 to 13583811 314678 + protein coding gene neuroblastoma amplified sequence
Tssr3797 12 13536466 to 13536490 24 + TSS region transcription start site region 3797
Tssr112831 12 13559175 to 13559182 7 + TSS region transcription start site region 112831
Tssr112832 12 13564132 to 13564136 4 + TSS region transcription start site region 112832
Tssr3798 12 13566127 to 13566152 25 + TSS region transcription start site region 3798
Tssr112833 12 13566155 to 13566168 13 + TSS region transcription start site region 112833
Tssr112834 12 13594240 to 13594244 4 + TSS region transcription start site region 112834
Gm35725 12 13607789 to 13627646 19857 - lincRNA gene predicted gene, 35725
D12Mit216 12 13645140 to 13645248 108 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 216
Gm35890 12 13668853 to 13676084 7231 + lincRNA gene predicted gene, 35890
Gm4929 12 13752674 to 13753665 991 - pseudogene predicted gene 4929
Gm38668 12 13785160 to 13788542 3382 - pseudogene predicted gene, 38668
Gm49374 12 13787903 to 13792337 4434 - pseudogene predicted gene, 49374
Gm7126 12 13788557 to 13790252 1695 - pseudogene predicted gene 7126
Gm9194 12 13790264 to 13791710 1446 - pseudogene predicted gene 9194
D12Mit241 12 13810804 to 13810921 117 DNA segment DNA Segment, Chr 12, Massachusetts Institute of Technology 241
D12Mit1008 12 13937207 to 13937360 153 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 1008
Gm48479 12 14013084 to 14057866 44782 + lincRNA gene predicted gene, 48479
Tssr112835 12 14018650 to 14018652 2 + TSS region transcription start site region 112835
Gm48480 12 14030352 to 14033321 2969 + lincRNA gene predicted gene, 48480
Gm48482 12 14128116 to 14130648 2532 - unclassified gene predicted gene, 48482
Tssr115780 12 14147101 to 14147105 4 - TSS region transcription start site region 115780
Lratd1 12 14147598 to 14152038 4440 - protein coding gene LRAT domain containing 1
Tssr115781 12 14148597 to 14148601 4 - TSS region transcription start site region 115781
Cpgi4433 12 14149490 to 14150885 1395 CpG island CpG island 4433
Cpgi4434 12 14151454 to 14152334 880 CpG island CpG island 4434
Tssr115782 12 14152041 to 14152069 28 - TSS region transcription start site region 115782
Tssr115783 12 14152071 to 14152082 11 - TSS region transcription start site region 115783
Gm36007 12 14234003 to 14256756 22753 + lncRNA gene predicted gene, 36007
Gm16497 12 14261534 to 14285684 24150 + lincRNA gene predicted gene 16497
Gm40840 12 14279418 to 14283646 4228 - lncRNA gene predicted gene, 40840
D12Mit82 12 14346848 to 14347013 165 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 82
Gm48498 12 14489404 to 14493244 3840 - pseudogene predicted gene, 48498
Gm9847 12 14494561 to 14495159 598 + pseudogene predicted pseudogene 9847
Gm25414 12 14506587 to 14506693 106 + snRNA gene predicted gene, 25414
Gm48504 12 14653662 to 14658855 5193 + unclassified gene predicted gene, 48504