MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 12:12728035-12928069

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
D12Ertd208e	12	12735085 to 12735328	243		DNA segment	DNA segment, Chr 12, ERATO Doi 208, expressed
Gm35104	12	12765994 to 12774296	8302	+	lncRNA gene	predicted gene, 35104
Tssr112813	12	12766009 to 12766020	11	+	TSS region	transcription start site region 112813
Tssr112814	12	12766028 to 12766031	3	+	TSS region	transcription start site region 112814
Tssr112815	12	12784669 to 12784680	11	+	TSS region	transcription start site region 112815
Platr19	12	12787985 to 12794285	6300	+	lincRNA gene	pluripotency associated transcript 19
Tssr115760	12	12788667 to 12788681	14	-	TSS region	transcription start site region 115760
Tssr115761	12	12788694 to 12788704	10	-	TSS region	transcription start site region 115761
Gm35155	12	12810723 to 12829248	18525	+	lncRNA gene	predicted gene, 35155
Tssr112816	12	12828035 to 12828069	34	+	TSS region	transcription start site region 112816
Tssr115762	12	12850714 to 12850723	9	-	TSS region	transcription start site region 115762
Gm48187	12	12865570 to 12874689	9119	+	lincRNA gene	predicted gene, 48187
4930519A11Rik	12	12902720 to 12907378	4658	+	lincRNA gene	RIKEN cDNA 4930519A11 gene
Cpgi4425	12	12904491 to 12905032	541		CpG island	CpG island 4425
Tssr112817	12	12909397 to 12909409	12	+	TSS region	transcription start site region 112817
Tssr112818	12	12909412 to 12909431	19	+	TSS region	transcription start site region 112818
Gm40271	12	12909428 to 12913029	3601	+	lincRNA gene	predicted gene, 40271
Rpl36-ps3	12	12912022 to 12912336	314	+	pseudogene	ribosomal protein L36, pseudogene 3