Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:118838150-119638159

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76 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Igan4 12 109783591 to 119061214 9277623 QTL IgA nephropathy 4
Cpgi5233 12 118842940 to 118843607 667 CpG island CpG island 5233
Sp8 12 118846329 to 118852576 6247 + protein coding gene trans-acting transcription factor 8
Cpgi5234 12 118846591 to 118847278 687 CpG island CpG island 5234
Tssr115563 12 118847206 to 118847217 11 + TSS region transcription start site region 115563
Tssr115564 12 118847227 to 118847238 11 + TSS region transcription start site region 115564
Tssr115565 12 118847305 to 118847311 6 + TSS region transcription start site region 115565
Tssr115566 12 118847548 to 118847568 20 + TSS region transcription start site region 115566
Tssr115567 12 118847572 to 118847584 12 + TSS region transcription start site region 115567
Cpgi5235 12 118848124 to 118850189 2065 CpG island CpG island 5235
Tssr115568 12 118848388 to 118848412 24 + TSS region transcription start site region 115568
Tssr115569 12 118851239 to 118851241 2 + TSS region transcription start site region 115569
Cpgi5236 12 118855055 to 118855455 400 CpG island CpG island 5236
Abcb5 12 118867824 to 118966421 98597 - protein coding gene ATP-binding cassette, sub-family B (MDR/TAP), member 5
Tssr118149 12 118908923 to 118908926 3 - TSS region transcription start site region 118149
Tssr118150 12 118924576 to 118924582 6 - TSS region transcription start site region 118150
Tssr118151 12 118966390 to 118966393 3 - TSS region transcription start site region 118151
Tssr118152 12 118966395 to 118966411 16 - TSS region transcription start site region 118152
Tssr115570 12 119030791 to 119030803 12 + TSS region transcription start site region 115570
Nils1 12 119060930 to 119061214 284 QTL neointima lesion size 1
D12Mit144 12 119060930 to 119061214 284 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 144
Gm18921 12 119067065 to 119067430 365 - pseudogene predicted gene, 18921
Tssr118153 12 119070528 to 119070548 20 - TSS region transcription start site region 118153
Tssr118154 12 119101542 to 119101551 9 - TSS region transcription start site region 118154
Tssr118155 12 119107773 to 119107779 6 - TSS region transcription start site region 118155
Tssr115571 12 119136014 to 119136018 4 + TSS region transcription start site region 115571
Tssr118156 12 119159868 to 119159878 10 - TSS region transcription start site region 118156
Tssr118157 12 119160356 to 119160359 3 - TSS region transcription start site region 118157
Tssr118158 12 119160577 to 119160589 12 - TSS region transcription start site region 118158
Tssr118159 12 119160794 to 119160804 10 - TSS region transcription start site region 118159
Tssr118160 12 119160840 to 119160854 14 - TSS region transcription start site region 118160
Tssr118161 12 119160913 to 119160921 8 - TSS region transcription start site region 118161
Itgb8 12 119162803 to 119238276 75473 - protein coding gene integrin beta 8
Tssr118162 12 119182093 to 119182105 12 - TSS region transcription start site region 118162
Tssr118163 12 119182135 to 119182144 9 - TSS region transcription start site region 118163
Tssr118164 12 119182288 to 119182309 21 - TSS region transcription start site region 118164
Tssr118165 12 119197215 to 119197254 39 - TSS region transcription start site region 118165
Tssr118166 12 119197700 to 119197706 6 - TSS region transcription start site region 118166
Tssr118167 12 119210255 to 119210257 2 - TSS region transcription start site region 118167
Tssr118168 12 119210450 to 119210455 5 - TSS region transcription start site region 118168
Tssr118169 12 119227628 to 119227648 20 - TSS region transcription start site region 118169
Tssr118170 12 119227807 to 119227817 10 - TSS region transcription start site region 118170
Tssr118171 12 119231991 to 119232000 9 - TSS region transcription start site region 118171
Tssr118172 12 119236870 to 119236873 3 - TSS region transcription start site region 118172
Cpgi5237 12 119237786 to 119239114 1328 CpG island CpG island 5237
Tssr118173 12 119237947 to 119238001 54 - TSS region transcription start site region 118173
Tssr118174 12 119238006 to 119238018 12 - TSS region transcription start site region 118174
Tssr118175 12 119238020 to 119238061 41 - TSS region transcription start site region 118175
Tssr118176 12 119238064 to 119238092 28 - TSS region transcription start site region 118176
Tssr118177 12 119238098 to 119238122 24 - TSS region transcription start site region 118177
Tssr118178 12 119238129 to 119238137 8 - TSS region transcription start site region 118178
Tssr118179 12 119238150 to 119238159 9 - TSS region transcription start site region 118179
Tssr118180 12 119238183 to 119238212 29 - TSS region transcription start site region 118180
Tssr118181 12 119238219 to 119238228 9 - TSS region transcription start site region 118181
Tssr115572 12 119238308 to 119238313 5 + TSS region transcription start site region 115572
Tssr118182 12 119238326 to 119238337 11 - TSS region transcription start site region 118182
Tssr118183 12 119238465 to 119238476 11 - TSS region transcription start site region 118183
Tssr118184 12 119238485 to 119238494 9 - TSS region transcription start site region 118184
Tssr118185 12 119238576 to 119238585 9 - TSS region transcription start site region 118185
Tssr118186 12 119238588 to 119238602 14 - TSS region transcription start site region 118186
Tssr118187 12 119238604 to 119238609 5 - TSS region transcription start site region 118187
Tssr118188 12 119238617 to 119238634 17 - TSS region transcription start site region 118188
Tssr118189 12 119238641 to 119238659 18 - TSS region transcription start site region 118189
Tssr118190 12 119238671 to 119238691 20 - TSS region transcription start site region 118190
Tssr118191 12 119238794 to 119238863 69 - TSS region transcription start site region 118191
Tssr118192 12 119238867 to 119238892 25 - TSS region transcription start site region 118192
Tssr115573 12 119260930 to 119260936 6 + TSS region transcription start site region 115573
Gm6768 12 119260978 to 119262855 1877 + pseudogene predicted gene 6768
Gm39562 12 119294407 to 119315648 21241 + lncRNA gene predicted gene, 39562
Gm46331 12 119326245 to 119334313 8068 + lncRNA gene predicted gene, 46331
Gm18032 12 119352518 to 119353052 534 + pseudogene predicted gene, 18032
Macc1 12 119390398 to 119466934 76536 + protein coding gene metastasis associated in colon cancer 1
Tssr115574 12 119390632 to 119390689 57 + TSS region transcription start site region 115574
Tssr115575 12 119390690 to 119390692 2 + TSS region transcription start site region 115575
Gm48681 12 119564371 to 119567251 2880 - lincRNA gene predicted gene, 48681
Gm9279 12 119609918 to 119611523 1605 + pseudogene predicted gene 9279