MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 12:116180542-116382212

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm46330	12	116196083 to 116197444	1361	+	lncRNA gene	predicted gene, 46330
Tssr118132	12	116200205 to 116200227	22	-	TSS region	transcription start site region 118132
Wdr60	12	116206262 to 116263022	56760	-	protein coding gene	WD repeat domain 60
Gm23190	12	116242504 to 116242567	63	-	miRNA gene	predicted gene, 23190
Tssr118133	12	116256032 to 116256046	14	-	TSS region	transcription start site region 118133
Cpgi5215	12	116262661 to 116263197	536		CpG island	CpG island 5215
Tssr118134	12	116262946 to 116263046	100	-	TSS region	transcription start site region 118134
Gm11027	12	116275386 to 116275612	226	+	protein coding gene	predicted gene 11027
Gm48079	12	116279682 to 116280231	549	-	lincRNA gene	predicted gene, 48079
Gm4132	12	116280380 to 116281125	745		unclassified gene	predicted gene 4132
Cpgi5216	12	116280542 to 116282212	1670		CpG island	CpG island 5216
Tssr115517	12	116281180 to 116281229	49	+	TSS region	transcription start site region 115517
Esyt2	12	116281196 to 116391050	109854	+	protein coding gene	extended synaptotagmin-like protein 2
Tssr115518	12	116281244 to 116281261	17	+	TSS region	transcription start site region 115518
Tssr115519	12	116281268 to 116281280	12	+	TSS region	transcription start site region 115519
Tssr115520	12	116281291 to 116281294	3	+	TSS region	transcription start site region 115520
Tssr115521	12	116373957 to 116373965	8	+	TSS region	transcription start site region 115521
2310058N22Rik	12	116379213 to 116380780	1567		unclassified gene	RIKEN cDNA 2310058N22 gene