Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:116032726-116191261

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi5213 12 116047546 to 116048262 716 CpG island CpG island 5213
Zfp386 12 116047707 to 116063231 15524 + protein coding gene zinc finger protein 386 (Kruppel-like)
Tssr115510 12 116047713 to 116047807 94 + TSS region transcription start site region 115510
Tssr3981 12 116047813 to 116047825 12 + TSS region transcription start site region 3981
Tssr3982 12 116047827 to 116047836 9 + TSS region transcription start site region 3982
Tssr115511 12 116048007 to 116048070 63 + TSS region transcription start site region 115511
Tssr115512 12 116055345 to 116055351 6 + TSS region transcription start site region 115512
Gm46383 12 116075152 to 116078237 3085 - lncRNA gene predicted gene, 46383
Cpgi5214 12 116077543 to 116078255 712 CpG island CpG island 5214
Tssr115513 12 116077720 to 116077839 119 + TSS region transcription start site region 115513
Vipr2 12 116077726 to 116146261 68535 + protein coding gene vasoactive intestinal peptide receptor 2
Gm20658 12 116100553 to 116112310 11757 - antisense lncRNA gene predicted gene 20658
Tssr115514 12 116140942 to 116140955 13 + TSS region transcription start site region 115514
Tssr115515 12 116140968 to 116140979 11 + TSS region transcription start site region 115515
Tssr115516 12 116140983 to 116140993 10 + TSS region transcription start site region 115516
Gm48618 12 116151603 to 116152341 738 - pseudogene predicted gene, 48618
Gm44372 12 116152101 to 116152221 120 - miRNA gene predicted gene, 44372
Gm48620 12 116162988 to 116163809 821 - pseudogene predicted gene, 48620
Gm23732 12 116173313 to 116173419 106 + snRNA gene predicted gene, 23732