Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:115998007-116098070

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16 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Igh 12 113258768 to 116009954 2751186 - complex/cluster/region immunoglobulin heavy chain complex
Ighv1-85 12 116000028 to 116000321 293 - gene segment immunoglobulin heavy variable 1-85
Tssr118130 12 116000506 to 116000516 10 - TSS region transcription start site region 118130
Ighv1-86 12 116009659 to 116009954 295 - gene segment immunoglobulin heavy variable 1-86
Tssr118131 12 116010137 to 116010141 4 - TSS region transcription start site region 118131
Cpgi5213 12 116047546 to 116048262 716 CpG island CpG island 5213
Zfp386 12 116047707 to 116063231 15524 + protein coding gene zinc finger protein 386 (Kruppel-like)
Tssr115510 12 116047713 to 116047807 94 + TSS region transcription start site region 115510
Tssr3981 12 116047813 to 116047825 12 + TSS region transcription start site region 3981
Tssr3982 12 116047827 to 116047836 9 + TSS region transcription start site region 3982
Tssr115511 12 116048007 to 116048070 63 + TSS region transcription start site region 115511
Tssr115512 12 116055345 to 116055351 6 + TSS region transcription start site region 115512
Gm46383 12 116075152 to 116078237 3085 - lncRNA gene predicted gene, 46383
Cpgi5214 12 116077543 to 116078255 712 CpG island CpG island 5214
Tssr115513 12 116077720 to 116077839 119 + TSS region transcription start site region 115513
Vipr2 12 116077726 to 116146261 68535 + protein coding gene vasoactive intestinal peptide receptor 2