Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:114864066-115724362

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92 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D12Mit134 12 114867852 to 114868033 181 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 134
Nociq3 12 114868033 to 86349301 -28518732 QTL nociceptive sensitivity inflammatory QTL 3
Ighv1-35 12 114875302 to 114875597 295 - pseudogenic gene segment immunoglobulin heavy variable 1-35
Ighv1-36 12 114879888 to 114880181 293 - gene segment immunoglobulin heavy variable 1-36
Tssr118105 12 114880370 to 114880375 5 - TSS region transcription start site region 118105
Ighv1-37 12 114896238 to 114896531 293 - gene segment immunoglobulin heavy variable 1-37
Tssr3977 12 114896721 to 114896725 4 - TSS region transcription start site region 3977
Ighv1-38 12 114910011 to 114910303 292 - pseudogenic gene segment immunoglobulin heavy variable V1-38
Tssr118106 12 114910491 to 114910499 8 - TSS region transcription start site region 118106
Ighv1-39 12 114914599 to 114914892 293 - gene segment immunoglobulin heavy variable 1-39
Tssr118107 12 114915080 to 114915086 6 - TSS region transcription start site region 118107
Ighv1-40 12 114924941 to 114925233 292 - pseudogenic gene segment immunoglobulin heavy variable V1-40
Ighv1-41 12 114932371 to 114932664 293 - pseudogenic gene segment immunoglobulin heavy variable 1-41
Tssr115508 12 114932398 to 114932402 4 + TSS region transcription start site region 115508
Tssr118108 12 114932829 to 114932838 9 - TSS region transcription start site region 118108
Ighv1-42 12 114937154 to 114937544 390 - gene segment immunoglobulin heavy variable V1-42
Tssr118109 12 114937592 to 114937598 6 - TSS region transcription start site region 118109
Ighv1-43 12 114945950 to 114946243 293 - gene segment immunoglobulin heavy variable V1-43
Tssr118110 12 114946413 to 114946438 25 - TSS region transcription start site region 118110
Ighv1-44 12 114963380 to 114963674 294 - pseudogenic gene segment immunoglobulin heavy variable V1-44
Ighv1-45 12 114970055 to 114970348 293 - pseudogenic gene segment immunoglobulin heavy variable V1-45
Ighv1-46 12 114977693 to 114977986 293 - pseudogenic gene segment immunoglobulin heavy variable V1-46
Ighv1-47 12 114991108 to 114991401 293 - gene segment immunoglobulin heavy variable 1-47
Tssr118111 12 114991576 to 114991582 6 - TSS region transcription start site region 118111
Ighv8-3 12 115003418 to 115003712 294 - pseudogenic gene segment immunoglobulin heavy variable V8-3
Ighv8-4 12 115024026 to 115024318 292 - gene segment immunoglobulin heavy variable V8-4
Tssr118112 12 115024470 to 115024474 4 - TSS region transcription start site region 118112
Ighv1-48 12 115038227 to 115038520 293 - pseudogenic gene segment immunoglobulin heavy variable V1-48
Ighv1-49 12 115055223 to 115055516 293 - gene segment immunoglobulin heavy variable 1-49
Ighv8-5 12 115067560 to 115067860 300 - gene segment immunoglobulin heavy variable V8-5
Tssr118113 12 115068012 to 115068018 6 - TSS region transcription start site region 118113
Ighv1-50 12 115119748 to 115120041 293 - gene segment immunoglobulin heavy variable 1-50
Ighv1-51 12 115131375 to 115131668 293 - pseudogenic gene segment immunoglobulin heavy variable V1-51
Ighv1-52 12 115145487 to 115145780 293 - gene segment immunoglobulin heavy variable 1-52
Ighv1-53 12 115158445 to 115158835 390 - gene segment immunoglobulin heavy variable 1-53
Ighv8-6 12 115165777 to 115166077 300 - gene segment immunoglobulin heavy variable V8-6
Gm9227 12 115175975 to 115176356 381 + pseudogene predicted gene 9227
Ighv1-54 12 115193675 to 115193968 293 - gene segment immunoglobulin heavy variable V1-54
Tssr118114 12 115194119 to 115194126 7 - TSS region transcription start site region 118114
Tssr118115 12 115194143 to 115194169 26 - TSS region transcription start site region 118115
Ighv1-55 12 115208137 to 115208527 390 - gene segment immunoglobulin heavy variable 1-55
Tssr3978 12 115224782 to 115224788 6 + TSS region transcription start site region 3978
Gm7142 12 115224859 to 115225387 528 + pseudogene predicted gene 7142
Ighv1-56 12 115242802 to 115243095 293 - gene segment immunoglobulin heavy variable 1-56
Gm7019 12 115244185 to 115244553 368 - pseudogene predicted pseudogene 7019
Tssr115509 12 115258086 to 115258126 40 + TSS region transcription start site region 115509
Ighv8-7 12 115258139 to 115258432 293 - pseudogenic gene segment immunoglobulin heavy variable V8-7
Gm30948 12 115262684 to 115287908 25224 + lincRNA gene predicted gene, 30948
Ighv1-57 12 115268424 to 115268715 291 - pseudogenic gene segment immunoglobulin heavy variable V1-57
Ighv8-8 12 115294066 to 115294362 296 - gene segment immunoglobulin heavy variable 8-8
Tssr118116 12 115294483 to 115294518 35 - TSS region transcription start site region 118116
Ighv1-58 12 115312166 to 115312597 431 - gene segment immunoglobulin heavy variable 1-58
Tssr118117 12 115312648 to 115312655 7 - TSS region transcription start site region 118117
Ighv1-59 12 115335082 to 115335514 432 - gene segment immunoglobulin heavy variable V1-59
Ighv1-60 12 115344537 to 115344830 293 - pseudogenic gene segment immunoglobulin heavy variable V1-60
Ighv1-61 12 115359140 to 115359433 293 - gene segment immunoglobulin heavy variable 1-61
Ighv1-62 12 115371986 to 115372278 292 - pseudogenic gene segment immunoglobulin heavy variable V1-62
Tssr118118 12 115372460 to 115372488 28 - TSS region transcription start site region 118118
Ighv1-62-1 12 115386707 to 115386988 281 - gene segment immunoglobulin heavy variable 1-62-1
Gm19331 12 115386846 to 115397688 10842 + lincRNA gene predicted gene, 19331
Gm37511 12 115404431 to 115404724 293 - pseudogenic gene segment predicted gene, 37511
Gm30996 12 115407614 to 115428251 20637 + lncRNA gene predicted gene, 30996
Gm38184 12 115412927 to 115413123 196 - pseudogenic gene segment predicted gene, 38184
Ighv1-62-2 12 115446417 to 115446710 293 - gene segment immunoglobulin heavy variable 1-62-2
Tssr118119 12 115446877 to 115446905 28 - TSS region transcription start site region 118119
Ighv1-62-3 12 115460999 to 115461431 432 - gene segment immunoglobulin heavy variable 1-62-3
Ighv8-9 12 115468331 to 115468632 301 - gene segment immunoglobulin heavy variable V8-9
Gm9236 12 115476518 to 115476902 384 + pseudogene predicted gene 9236
Ighv1-63 12 115495625 to 115496058 433 - gene segment immunoglobulin heavy variable V1-63
Gm27722 12 115499019 to 115499094 75 - miRNA gene predicted gene, 27722
Ighv1-64 12 115507587 to 115507977 390 - gene segment immunoglobulin heavy variable 1-64
Tssr118120 12 115508014 to 115508034 20 - TSS region transcription start site region 118120
Ighv8-10 12 115519340 to 115519640 300 - pseudogenic gene segment immunoglobulin heavy variable V8-10
Gm18340 12 115526351 to 115526959 608 + pseudogene predicted gene, 18340
Ighv1-65 12 115532055 to 115532347 292 - pseudogenic gene segment immunoglobulin heavy variable V1-65
Gm9238 12 115546069 to 115546397 328 - pseudogene predicted gene 9238
Ighv8-11 12 115567149 to 115567449 300 - gene segment immunoglobulin heavy variable V8-11
Rpl7a-ps2 12 115590407 to 115591134 727 + pseudogene ribosomal protein L7A, pseudogene 2
Ighv1-66 12 115593110 to 115593403 293 - gene segment immunoglobulin heavy variable 1-66
Ighv1-67 12 115603940 to 115604233 293 - gene segment immunoglobulin heavy variable V1-67
Tssr118121 12 115604411 to 115604432 21 - TSS region transcription start site region 118121
Ighv1-68 12 115611340 to 115611633 293 - pseudogenic gene segment immunoglobulin heavy variable V1-68
Gm5660 12 115616135 to 115616803 668 + pseudogene predicted gene 5660
Gm9245 12 115617272 to 115617950 678 + pseudogene predicted gene 9245
Ighv1-69 12 115623203 to 115623595 392 - gene segment immunoglobulin heavy variable 1-69
Tssr3979 12 115623640 to 115623653 13 - TSS region transcription start site region 3979
Ighv8-12 12 115647945 to 115648245 300 - gene segment immunoglobulin heavy variable V8-12
Gm6105 12 115659264 to 115659788 524 + pseudogene predicted gene 6105
Gm44782 12 115688840 to 115688889 49 + pseudogene predicted gene 44782
Ighv1-70 12 115691889 to 115692182 293 - gene segment immunoglobulin heavy variable 1-70
Mir6388 12 115695720 to 115695794 74 - miRNA gene microRNA 6388
Gm40900 12 115703830 to 115715167 11337 + lncRNA gene predicted gene, 40900