Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:11461518-12301823

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rad51ap2 12 11456079 to 11462928 6849 + protein coding gene RAD51 associated protein 2
D12Mit168 12 11465395 to 11465581 186 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 168
Gm47807 12 11499295 to 11499892 597 + pseudogene predicted gene, 47807
Gm47808 12 11507226 to 11512390 5164 - unclassified non-coding RNA gene predicted gene, 47808
Tcq14 12 11610000 to 97210000 85600000 QTL total cholesterol QTL 14
Gm4803 12 11665771 to 11667049 1278 - pseudogene predicted gene 4803
Gm23781 12 11688697 to 11689004 307 - unclassified non-coding RNA gene predicted gene, 23781
Gm47821 12 11698868 to 11700546 1678 - unclassified gene predicted gene, 47821
Gm47822 12 11701306 to 11701678 372 - unclassified gene predicted gene, 47822
Gm6867 12 11760447 to 11760871 424 - pseudogene predicted gene 6867
Gm47833 12 11781535 to 11792951 11416 + lincRNA gene predicted gene, 47833
Tssr112804 12 11802132 to 11802133 1 + TSS region transcription start site region 112804
Gm34237 12 11826706 to 11897710 71004 + lincRNA gene predicted gene, 34237
Cpgi4421 12 11881518 to 11881823 305 CpG island CpG island 4421
Tubb2a-ps2 12 11882196 to 11882899 703 - pseudogene tubulin, beta 2a, pseudogene 2
Tssr115749 12 11882392 to 11882417 25 - TSS region transcription start site region 115749
Tssr112805 12 11882466 to 11882487 21 + TSS region transcription start site region 112805
Gm25610 12 12013623 to 12013751 128 + snoRNA gene predicted gene, 25610
Tssr112806 12 12022997 to 12023001 4 + TSS region transcription start site region 112806
Gm4294 12 12023045 to 12023658 613 + pseudogene predicted gene 4294
Gm46334 12 12031934 to 12039401 7467 + lncRNA gene predicted gene, 46334
Gm18240 12 12097732 to 12123271 25539 - pseudogene predicted gene, 18240
Gm26171 12 12106737 to 12106867 130 + rRNA gene predicted gene, 26171
Gm34348 12 12145208 to 12147695 2487 - lncRNA gene predicted gene, 34348
Tssr3794 12 12170538 to 12170540 2 - TSS region transcription start site region 3794
Tssr115750 12 12177311 to 12177331 20 - TSS region transcription start site region 115750
Gm40838 12 12237189 to 12254299 17110 + lncRNA gene predicted gene, 40838
Cpgi4422 12 12261806 to 12262771 965 CpG island CpG island 4422
Fam49a 12 12262133 to 12376363 114230 + protein coding gene family with sequence similarity 49, member A
Tssr112807 12 12262139 to 12262157 18 + TSS region transcription start site region 112807
Tssr112808 12 12262164 to 12262191 27 + TSS region transcription start site region 112808
Gm34407 12 12284555 to 12289464 4909 - lncRNA gene predicted gene, 34407
9530022J15Rik 12 12293444 to 12294051 607 unclassified gene RIKEN cDNA 9530022J15 gene