MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 12:11420395-11510581

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Vsnl1	12	11325242 to 11436613	111371	-	protein coding gene	visinin-like 1
Tssr115745	12	11435638 to 11435653	15	-	TSS region	transcription start site region 115745
Tssr3791	12	11436475 to 11436487	12	-	TSS region	transcription start site region 3791
Cpgi4418	12	11436489 to 11436772	283		CpG island	CpG island 4418
Tssr115746	12	11436498 to 11436509	11	-	TSS region	transcription start site region 115746
Tssr3792	12	11436518 to 11436540	22	-	TSS region	transcription start site region 3792
Tssr115747	12	11436550 to 11436603	53	-	TSS region	transcription start site region 115747
Tssr115748	12	11436607 to 11436618	11	-	TSS region	transcription start site region 115748
Tssr3793	12	11436711 to 11436720	9	-	TSS region	transcription start site region 3793
Cpgi4419	12	11438020 to 11438277	257		CpG island	CpG island 4419
Tssr112802	12	11438191 to 11438238	47	+	TSS region	transcription start site region 112802
4930511A02Rik	12	11438233 to 11444812	6579	+	lincRNA gene	RIKEN cDNA 4930511A02 gene
Cpgi4420	12	11455744 to 11456419	675		CpG island	CpG island 4420
Tssr112803	12	11456052 to 11456058	6	+	TSS region	transcription start site region 112803
Rad51ap2	12	11456079 to 11462928	6849	+	protein coding gene	RAD51 associated protein 2
D12Mit168	12	11465395 to 11465581	186		DNA segment	DNA segment, Chr 12, Massachusetts Institute of Technology 168
Gm47807	12	11499295 to 11499892	597	+	pseudogene	predicted gene, 47807
Gm47808	12	11507226 to 11512390	5164	-	unclassified non-coding RNA gene	predicted gene, 47808