Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:113506953-114357246

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120 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ighd3-1 12 113525313 to 113525329 16 - gene segment immunoglobulin heavy diversity 3-1
D12Mit263 12 113526429 to 113526541 112 DNA segment DNA Segment, Chr 12, Massachusetts Institute of Technology 263
Ighd5-1 12 113526800 to 113526809 9 - pseudogenic gene segment immunoglobulin heavy diversity 5-1
Gm16968 12 113528032 to 113528054 22 - gene segment predicted gene, 16968
Adam6a 12 113543908 to 113546414 2506 + protein coding gene a disintegrin and metallopeptidase domain 6A
Ighv5-1 12 113572929 to 113573222 293 - pseudogenic gene segment immunoglobulin heavy variable V5-1
Ighv2-1 12 113574247 to 113574540 293 - pseudogenic gene segment immunoglobulin heavy variable 2-1
Ighv5-2 12 113578504 to 113578990 486 - gene segment immunoglobulin heavy variable 5-2
Tssr118040 12 113579056 to 113579073 17 - TSS region transcription start site region 118040
Ighv2-2 12 113588267 to 113588700 433 - gene segment immunoglobulin heavy variable 2-2
Tssr118041 12 113588721 to 113588734 13 - TSS region transcription start site region 118041
Ighv5-3 12 113589967 to 113590243 276 - pseudogenic gene segment immunoglobulin heavy variable V5-3
Ighv5-4 12 113597448 to 113597741 293 - gene segment immunoglobulin heavy variable 5-4
Tssr118042 12 113597974 to 113597983 9 - TSS region transcription start site region 118042
Ighv6-1 12 113603460 to 113603928 468 - pseudogenic gene segment immunoglobulin heavy variable V6-1
Ighv2-3 12 113611184 to 113611476 292 - gene segment immunoglobulin heavy variable 2-3
Tssr118043 12 113611643 to 113611648 5 - TSS region transcription start site region 118043
Ighv5-5 12 113612989 to 113613442 453 - pseudogenic gene segment immunoglobulin heavy variable V5-5
Ighv5-6 12 113625508 to 113625801 293 - gene segment immunoglobulin heavy variable 5-6
Tssr118044 12 113626023 to 113626037 14 - TSS region transcription start site region 118044
Gm9517 12 113629994 to 113630867 873 - pseudogene predicted gene 9517
Ighv5-7 12 113634686 to 113634981 295 - pseudogenic gene segment immunoglobulin heavy variable V5-7
Ighv2-4 12 113653291 to 113653583 292 - gene segment immunoglobulin heavy variable V2-4
Ighv5-8 12 113654967 to 113655245 278 - pseudogenic gene segment immunoglobulin heavy variable V5-8
Ighv5-9 12 113661771 to 113662228 457 - gene segment immunoglobulin heavy variable 5-9
Tssr118045 12 113662293 to 113662309 16 - TSS region transcription start site region 118045
Ighv5-10 12 113669673 to 113669968 295 - pseudogenic gene segment immunoglobulin heavy variable 5-10
Gm37187 12 113682466 to 113682891 425 - pseudogenic gene segment predicted gene, 37187
Ighv2-5 12 113685482 to 113685774 292 - gene segment immunoglobulin heavy variable 2-5
Ighv5-11 12 113687229 to 113687505 276 - pseudogenic gene segment immunoglobulin heavy variable V5-11
Ighv5-12 12 113702126 to 113702419 293 - gene segment immunoglobulin heavy variable 5-12
Tssr118046 12 113702651 to 113702662 11 - TSS region transcription start site region 118046
Ighv2-6 12 113716672 to 113716962 290 - gene segment immunoglobulin heavy variable 2-6
Gm37976 12 113718318 to 113719231 913 - pseudogenic gene segment predicted gene, 37976
Gm37418 12 113724761 to 113725196 435 - pseudogenic gene segment predicted gene, 37418
Ighv5-9-1 12 113736113 to 113736406 293 - gene segment immunoglobulin heavy variable 5-9-1
Tssr118047 12 113736641 to 113736659 18 - TSS region transcription start site region 118047
Gm38203 12 113745520 to 113745889 369 - pseudogenic gene segment predicted gene, 38203
Ighv5-12-4 12 113762251 to 113762544 293 - gene segment immunoglobulin heavy variable 5-12-4
Gm38205 12 113767840 to 113768220 380 - pseudogenic gene segment predicted gene, 38205
Ighv2-9-1 12 113769857 to 113770142 285 - gene segment immunoglobulin heavy variable 2-9-1
Gm37722 12 113772004 to 113772334 330 - pseudogenic gene segment predicted gene, 37722
Ighv5-13 12 113794063 to 113794358 295 - pseudogenic gene segment immunoglobulin heavy variable V5-13
Ighv2-6-8 12 113796138 to 113796430 292 - gene segment immunoglobulin heavy variable 2-6-8
Gm7003 12 113803004 to 113803206 202 - pseudogenic gene segment predicted gene 7003
Ighv2-7 12 113807314 to 113807747 433 - gene segment immunoglobulin heavy variable 2-7
Tssr118048 12 113807773 to 113807779 6 - TSS region transcription start site region 118048
Rpl26-ps3 12 113825226 to 113825660 434 + pseudogene ribosomal protein L26, pseudogene 3
Ighv5-15 12 113826648 to 113826941 293 - gene segment immunoglobulin heavy variable 5-15
Tssr118049 12 113827187 to 113827204 17 - TSS region transcription start site region 118049
Ighv5-16 12 113838528 to 113838821 293 - gene segment immunoglobulin heavy variable 5-16
Tssr118050 12 113839029 to 113839045 16 - TSS region transcription start site region 118050
Ighv5-17 12 113859149 to 113859442 293 - gene segment immunoglobulin heavy variable 5-17
Tssr118051 12 113859682 to 113859700 18 - TSS region transcription start site region 118051
Ighv5-18 12 113875796 to 113876239 443 - pseudogenic gene segment immunoglobulin heavy variable V5-18
Ighv2-8 12 113877361 to 113877659 298 - pseudogenic gene segment immunoglobulin heavy variable V2-8
Ighv2-9 12 113879097 to 113879388 291 - gene segment immunoglobulin heavy variable 2-9
Tssr118052 12 113879554 to 113879558 4 - TSS region transcription start site region 118052
Ighv5-19 12 113884761 to 113885057 296 - pseudogenic gene segment immunoglobulin heavy variable V5-19
Ighv7-1 12 113896408 to 113896946 538 - pseudogenic gene segment immunoglobulin heavy variable 7-1
Im6 12 113896717 to 113896905 188 QTL immunoregulatory 6
Sluc12 12 113896717 to 113896905 188 QTL susceptibility to lung cancer 12
D12Nds2 12 113896717 to 113896905 188 DNA segment DNA segment, Chr 12, Nuffield Department of Surgery 2
Tssr115506 12 113896919 to 113896922 3 + TSS region transcription start site region 115506
Tssr118053 12 113897004 to 113897010 6 - TSS region transcription start site region 118053
Ighv7-2 12 113912025 to 113912483 458 - gene segment immunoglobulin heavy variable 7-2
Ighv14-1 12 113931953 to 113932246 293 - gene segment immunoglobulin heavy variable 14-1
Tssr118054 12 113932424 to 113932432 8 - TSS region transcription start site region 118054
Ighv4-1 12 113948284 to 113948577 293 - gene segment immunoglobulin heavy variable 4-1
Ighv3-1 12 113964390 to 113964683 293 - gene segment immunoglobulin heavy variable 3-1
Tssr118055 12 113964865 to 113964874 9 - TSS region transcription start site region 118055
Gm37961 12 113968554 to 113968852 298 - pseudogenic gene segment predicted gene, 37961
Ighv11-1 12 113981879 to 113982174 295 - gene segment immunoglobulin heavy variable 11-1
Ighv14-2 12 113994469 to 113994898 429 - gene segment immunoglobulin heavy variable 14-2
Tssr118056 12 113994940 to 113994949 9 - TSS region transcription start site region 118056
Ighv4-2 12 114013144 to 114013439 295 - pseudogenic gene segment immunoglobulin heavy variable V4-2
Ighv3-2 12 114033803 to 114034097 294 - pseudogenic gene segment immunoglobulin heavy variable 3-2
Ighv11-2 12 114048241 to 114048704 463 - gene segment immunoglobulin heavy variable V11-2
Tssr118057 12 114048736 to 114048746 10 - TSS region transcription start site region 118057
Tssr118058 12 114048748 to 114048769 21 - TSS region transcription start site region 118058
Tssr3974 12 114048779 to 114048780 1 - TSS region transcription start site region 3974
Ighv14-3 12 114059845 to 114060273 428 - gene segment immunoglobulin heavy variable V14-3
Tssr118059 12 114060315 to 114060322 7 - TSS region transcription start site region 118059
Ighv16-1 12 114068828 to 114069126 298 - gene segment immunoglobulin heavy variable 16-1
Ighv6-2 12 114089387 to 114089681 294 - pseudogenic gene segment immunoglobulin heavy variable V6-2
Ighv9-1 12 114093928 to 114094221 293 - gene segment immunoglobulin heavy variable 9-1
Ighv12-1 12 114107259 to 114107563 304 - pseudogenic gene segment immunoglobulin heavy variable V12-1
Ighv9-2 12 114109001 to 114109430 429 - gene segment immunoglobulin heavy variable V9-2
Tssr118060 12 114109460 to 114109493 33 - TSS region transcription start site region 118060
Ighv12-2 12 114127533 to 114127984 451 - pseudogenic gene segment immunoglobulin heavy variable V12-2
Tssr118061 12 114128016 to 114128045 29 - TSS region transcription start site region 118061
Ighv9-3 12 114140692 to 114141122 430 - gene segment immunoglobulin heavy variable V9-3
Tssr118062 12 114141122 to 114141133 11 - TSS region transcription start site region 118062
Ighv7-3 12 114153180 to 114153644 464 - pseudogenic gene segment immunoglobulin heavy variable 7-3
Tssr118063 12 114153714 to 114153724 10 - TSS region transcription start site region 118063
Ighv15-1 12 114158040 to 114158315 275 - pseudogenic gene segment immunoglobulin heavy variable V15-1
Ighv14-4 12 114176438 to 114176867 429 - gene segment immunoglobulin heavy variable 14-4
Tssr118064 12 114176909 to 114176918 9 - TSS region transcription start site region 118064
Gm37838 12 114188689 to 114189000 311 - pseudogene predicted gene, 37838
Ighv3-3 12 114196439 to 114196875 436 - gene segment immunoglobulin heavy variable V3-3
Tssr118065 12 114196924 to 114196937 13 - TSS region transcription start site region 118065
Ighv7-4 12 114222788 to 114223254 466 - gene segment immunoglobulin heavy variable 7-4
Tssr118066 12 114223325 to 114223334 9 - TSS region transcription start site region 118066
Ighv3-4 12 114253617 to 114253915 298 - gene segment immunoglobulin heavy variable V3-4
Tssr118067 12 114254097 to 114254104 7 - TSS region transcription start site region 118067
Ighv3-5 12 114262652 to 114262950 298 - gene segment immunoglobulin heavy variable 3-5
Tssr118068 12 114263138 to 114263145 7 - TSS region transcription start site region 118068
Gm18551 12 114265607 to 114266248 641 - pseudogene predicted gene, 18551
Ighv13-1 12 114267613 to 114267906 293 - gene segment immunoglobulin heavy variable 13-1
Ighv3-6 12 114288152 to 114288447 295 - gene segment immunoglobulin heavy variable 3-6
Tssr118069 12 114288626 to 114288643 17 - TSS region transcription start site region 118069
Ighv9-4 12 114299961 to 114300254 293 - gene segment immunoglobulin heavy variable 9-4
Tssr118070 12 114300418 to 114300453 35 - TSS region transcription start site region 118070
Ighv3-7 12 114314186 to 114314479 293 - pseudogenic gene segment immunoglobulin heavy variable V3-7
Ighv5-21 12 114320030 to 114320324 294 - pseudogenic gene segment immunoglobulin heavy variable V5-21
Ighv3-8 12 114322376 to 114322666 290 - gene segment immunoglobulin heavy variable V3-8
Tssr118071 12 114322844 to 114322860 16 - TSS region transcription start site region 118071
Tssr115507 12 114323025 to 114323037 12 + TSS region transcription start site region 115507
Ighv8-1 12 114332796 to 114333086 290 - pseudogenic gene segment immunoglobulin heavy variable V8-1
Ighv1-1 12 114351705 to 114351995 290 - pseudogenic gene segment immunoglobulin heavy variable V1-1