Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:113149376-113279588

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
9230109C02Rik 12 113150389 to 113151357 968 unclassified gene RIKEN cDNA 9230109C02 gene
Cpgi5204 12 113151824 to 113152629 805 CpG island CpG island 5204
Crip1 12 113152012 to 113153879 1867 + protein coding gene cysteine-rich protein 1 (intestinal)
Tssr115489 12 113152043 to 113152057 14 + TSS region transcription start site region 115489
Tssr115490 12 113152637 to 113152651 14 + TSS region transcription start site region 115490
Tssr115491 12 113152771 to 113152800 29 + TSS region transcription start site region 115491
Tssr117937 12 113153874 to 113153877 3 - TSS region transcription start site region 117937
Cpgi5205 12 113155090 to 113156765 1675 CpG island CpG island 5205
Tssr117938 12 113155190 to 113155201 11 - TSS region transcription start site region 117938
Tssr115492 12 113155362 to 113155384 22 + TSS region transcription start site region 115492
Tssr115493 12 113156403 to 113156442 39 + TSS region transcription start site region 115493
Tedc1 12 113156421 to 113165458 9037 + protein coding gene tubulin epsilon and delta complex 1
Gm43310 12 113172487 to 113173306 819 - pseudogene predicted gene 43310
Cpgi5206 12 113185207 to 113186776 1569 CpG island CpG island 5206
Tssr115494 12 113185877 to 113185937 60 + TSS region transcription start site region 115494
Tmem121 12 113185930 to 113189523 3593 + protein coding gene transmembrane protein 121
Cpgi5207 12 113187485 to 113189374 1889 CpG island CpG island 5207
Cpgi5208 12 113204309 to 113204489 180 CpG island CpG island 5208
Gm25622 12 113214149 to 113214252 103 + snRNA gene predicted gene, 25622
Cpgi5209 12 113214376 to 113214588 212 CpG island CpG island 5209
Tssr117939 12 113215020 to 113215054 34 - TSS region transcription start site region 117939
Igha 12 113256204 to 113260236 4032 - gene segment immunoglobulin heavy constant alpha
Tssr3968 12 113258740 to 113258788 48 - TSS region transcription start site region 3968
Igh 12 113258768 to 116009954 2751186 - complex/cluster/region immunoglobulin heavy chain complex
Tssr3969 12 113259120 to 113259141 21 - TSS region transcription start site region 3969
Tssr117940 12 113259540 to 113259549 9 - TSS region transcription start site region 117940
Tssr115495 12 113259627 to 113259658 31 + TSS region transcription start site region 115495
Tssr117941 12 113259670 to 113259706 36 - TSS region transcription start site region 117941
Tssr117942 12 113259974 to 113259982 8 - TSS region transcription start site region 117942
Tssr117943 12 113260028 to 113260039 11 - TSS region transcription start site region 117943
Tssr117944 12 113260046 to 113260062 16 - TSS region transcription start site region 117944
Tssr115496 12 113260160 to 113260171 11 + TSS region transcription start site region 115496
Tssr115497 12 113260176 to 113260197 21 + TSS region transcription start site region 115497
Tssr117945 12 113260217 to 113260232 15 - TSS region transcription start site region 117945
Igh-7 12 113264521 to 113277715 13194 gene segment immunoglobulin heavy chain 7 (heavy chain of IgE)
Igh-Ia 12 113264670 to 113265262 592 gene segment immunoglobulin heavy chain Ia
Tssr117946 12 113265070 to 113265082 12 - TSS region transcription start site region 117946
Tssr117947 12 113265132 to 113265147 15 - TSS region transcription start site region 117947
Ighe 12 113269263 to 113273248 3985 - gene segment Immunoglobulin heavy constant epsilon