Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:113067864-113217880

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62 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pacs2 12 113014508 to 113074401 59893 + protein coding gene phosphofurin acidic cluster sorting protein 2
Cpgi5200 12 113074063 to 113075019 956 CpG island CpG island 5200
Tssr115466 12 113074475 to 113074524 49 + TSS region transcription start site region 115466
Tex22 12 113074502 to 113088917 14415 + protein coding gene testis expressed gene 22
Tssr115467 12 113074764 to 113074775 11 + TSS region transcription start site region 115467
Tssr115468 12 113074777 to 113074801 24 + TSS region transcription start site region 115468
Tssr115469 12 113074805 to 113074818 13 + TSS region transcription start site region 115469
Tssr115470 12 113074819 to 113074822 3 + TSS region transcription start site region 115470
Cpgi5201 12 113097397 to 113099414 2017 CpG island CpG island 5201
Tssr115471 12 113098199 to 113098267 68 + TSS region transcription start site region 115471
Mta1 12 113098278 to 113137206 38928 + protein coding gene metastasis associated 1
Tssr115472 12 113132829 to 113132852 23 + TSS region transcription start site region 115472
Tssr115473 12 113133176 to 113133215 39 + TSS region transcription start site region 115473
Tssr115474 12 113133469 to 113133480 11 + TSS region transcription start site region 115474
Tssr115475 12 113133508 to 113133528 20 + TSS region transcription start site region 115475
F930026P19Rik 12 113138355 to 113140140 1785 - lncRNA gene RIKEN cDNA F930026P19 gene
Cpgi5202 12 113139717 to 113141258 1541 CpG island CpG island 5202
Tssr117934 12 113140098 to 113140106 8 - TSS region transcription start site region 117934
Tssr117935 12 113140126 to 113140143 17 - TSS region transcription start site region 117935
Tssr115476 12 113140198 to 113140257 59 + TSS region transcription start site region 115476
Crip2 12 113140236 to 113145506 5270 + protein coding gene cysteine rich protein 2
Tssr115477 12 113140473 to 113140482 9 + TSS region transcription start site region 115477
Tssr115478 12 113140500 to 113140565 65 + TSS region transcription start site region 115478
Tssr115479 12 113140566 to 113140577 11 + TSS region transcription start site region 115479
Tssr3963 12 113140592 to 113140599 7 + TSS region transcription start site region 3963
Tssr3964 12 113140603 to 113140608 5 + TSS region transcription start site region 3964
Tssr3965 12 113140666 to 113140670 4 + TSS region transcription start site region 3965
Tssr3966 12 113140707 to 113140718 11 + TSS region transcription start site region 3966
Tssr115480 12 113141504 to 113141509 5 + TSS region transcription start site region 115480
Tssr115481 12 113142765 to 113142823 58 + TSS region transcription start site region 115481
Tssr115482 12 113142836 to 113142861 25 + TSS region transcription start site region 115482
Tssr115483 12 113142864 to 113142880 16 + TSS region transcription start site region 115483
Tssr115484 12 113143510 to 113143547 37 + TSS region transcription start site region 115484
Tssr115485 12 113144024 to 113144037 13 + TSS region transcription start site region 115485
Tssr3967 12 113145462 to 113145474 12 + TSS region transcription start site region 3967
Gm30599 12 113145603 to 113147877 2274 + protein coding gene predicted gene, 30599
Tssr115486 12 113146311 to 113146335 24 + TSS region transcription start site region 115486
Tssr115487 12 113146479 to 113146527 48 + TSS region transcription start site region 115487
Cpgi5203 12 113146481 to 113147138 657 CpG island CpG island 5203
Tssr117936 12 113147509 to 113147521 12 - TSS region transcription start site region 117936
Tssr115488 12 113148691 to 113148704 13 + TSS region transcription start site region 115488
9230109C02Rik 12 113150389 to 113151357 968 unclassified gene RIKEN cDNA 9230109C02 gene
Cpgi5204 12 113151824 to 113152629 805 CpG island CpG island 5204
Crip1 12 113152012 to 113153879 1867 + protein coding gene cysteine-rich protein 1 (intestinal)
Tssr115489 12 113152043 to 113152057 14 + TSS region transcription start site region 115489
Tssr115490 12 113152637 to 113152651 14 + TSS region transcription start site region 115490
Tssr115491 12 113152771 to 113152800 29 + TSS region transcription start site region 115491
Tssr117937 12 113153874 to 113153877 3 - TSS region transcription start site region 117937
Cpgi5205 12 113155090 to 113156765 1675 CpG island CpG island 5205
Tssr117938 12 113155190 to 113155201 11 - TSS region transcription start site region 117938
Tssr115492 12 113155362 to 113155384 22 + TSS region transcription start site region 115492
Tssr115493 12 113156403 to 113156442 39 + TSS region transcription start site region 115493
Tedc1 12 113156421 to 113165458 9037 + protein coding gene tubulin epsilon and delta complex 1
Gm43310 12 113172487 to 113173306 819 - pseudogene predicted gene 43310
Cpgi5206 12 113185207 to 113186776 1569 CpG island CpG island 5206
Tssr115494 12 113185877 to 113185937 60 + TSS region transcription start site region 115494
Tmem121 12 113185930 to 113189523 3593 + protein coding gene transmembrane protein 121
Cpgi5207 12 113187485 to 113189374 1889 CpG island CpG island 5207
Cpgi5208 12 113204309 to 113204489 180 CpG island CpG island 5208
Gm25622 12 113214149 to 113214252 103 + snRNA gene predicted gene, 25622
Cpgi5209 12 113214376 to 113214588 212 CpG island CpG island 5209
Tssr117939 12 113215020 to 113215054 34 - TSS region transcription start site region 117939