MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 12:112955085-113005704

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
6530406A20Rik	12	112955546 to 112958397	2851		unclassified gene	RIKEN cDNA 6530406A20 gene
Tssr117926	12	112959508 to 112959528	20	-	TSS region	transcription start site region 117926
Tssr117927	12	112959530 to 112959549	19	-	TSS region	transcription start site region 117927
Brf1	12	112960085 to 113000704	40619	-	protein coding gene	BRF1, RNA polymerase III transcription initiation factor 90 kDa subunit
Cpgi5195	12	112965834 to 112965991	157		CpG island	CpG island 5195
Gm47541	12	112971745 to 112972145	400	-	sense intronic lncRNA gene	predicted gene, 47541
Cpgi5196	12	112976249 to 112977518	1269		CpG island	CpG island 5196
Tssr115449	12	112976471 to 112976552	81	+	TSS region	transcription start site region 115449
Btbd6	12	112976482 to 112978945	2463	+	protein coding gene	BTB (POZ) domain containing 6
Tssr115450	12	112976745 to 112976752	7	+	TSS region	transcription start site region 115450
Cpgi5197	12	112999712 to 113001263	1551		CpG island	CpG island 5197
9230104M06Rik	12	112999964 to 113001926	1962	+	antisense lncRNA gene	RIKEN cDNA 9230104M06 gene
Tssr117928	12	113000226 to 113000238	12	-	TSS region	transcription start site region 117928
Tssr117929	12	113000243 to 113000269	26	-	TSS region	transcription start site region 117929
Tssr117930	12	113000392 to 113000466	74	-	TSS region	transcription start site region 117930
Tssr117931	12	113000624 to 113000656	32	-	TSS region	transcription start site region 117931
Tssr117932	12	113000658 to 113000695	37	-	TSS region	transcription start site region 117932