Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:112770229-112879423

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67 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ahnak2 12 112772194 to 112802657 30463 - protein coding gene AHNAK nucleoprotein 2
Tssr115431 12 112785071 to 112785094 23 + TSS region transcription start site region 115431
Tssr117889 12 112785111 to 112785122 11 - TSS region transcription start site region 117889
Tssr117890 12 112785154 to 112785170 16 - TSS region transcription start site region 117890
Tssr117891 12 112785173 to 112785210 37 - TSS region transcription start site region 117891
Tssr117892 12 112785217 to 112785235 18 - TSS region transcription start site region 117892
Tssr117893 12 112785246 to 112785276 30 - TSS region transcription start site region 117893
Tssr117894 12 112785281 to 112785312 31 - TSS region transcription start site region 117894
Tssr117895 12 112785366 to 112785389 23 - TSS region transcription start site region 117895
Tssr117896 12 112785419 to 112785449 30 - TSS region transcription start site region 117896
Tssr117897 12 112785483 to 112785495 12 - TSS region transcription start site region 117897
Tssr117898 12 112785561 to 112785580 19 - TSS region transcription start site region 117898
Tssr117899 12 112785583 to 112785599 16 - TSS region transcription start site region 117899
Tssr117900 12 112785743 to 112785763 20 - TSS region transcription start site region 117900
Tssr117901 12 112785884 to 112785895 11 - TSS region transcription start site region 117901
Tssr117902 12 112786211 to 112786237 26 - TSS region transcription start site region 117902
Tssr115432 12 112794275 to 112794289 14 + TSS region transcription start site region 115432
Tssr117903 12 112795686 to 112795754 68 - TSS region transcription start site region 117903
Tssr117904 12 112795781 to 112795794 13 - TSS region transcription start site region 117904
Tssr3959 12 112795807 to 112795835 28 - TSS region transcription start site region 3959
Tssr117905 12 112795930 to 112795961 31 - TSS region transcription start site region 117905
Tssr115433 12 112796014 to 112796036 22 + TSS region transcription start site region 115433
Tssr115434 12 112796037 to 112796081 44 + TSS region transcription start site region 115434
Tssr117906 12 112797085 to 112797134 49 - TSS region transcription start site region 117906
Tssr117907 12 112797646 to 112797657 11 - TSS region transcription start site region 117907
Tssr117908 12 112797721 to 112797742 21 - TSS region transcription start site region 117908
Cpgi5182 12 112802043 to 112802946 903 CpG island CpG island 5182
Tssr117909 12 112802646 to 112802665 19 - TSS region transcription start site region 117909
Tssr117910 12 112803584 to 112803585 1 - TSS region transcription start site region 117910
Cpgi5183 12 112804108 to 112804292 184 CpG island CpG island 5183
Cpgi5184 12 112808386 to 112809725 1339 CpG island CpG island 5184
Tssr115435 12 112808914 to 112809002 88 + TSS region transcription start site region 115435
Clba1 12 112808975 to 112816245 7270 + protein coding gene clathrin binding box of aftiphilin containing 1
Tssr115436 12 112809271 to 112809285 14 + TSS region transcription start site region 115436
Tssr115437 12 112809289 to 112809329 40 + TSS region transcription start site region 115437
Tssr115438 12 112809333 to 112809364 31 + TSS region transcription start site region 115438
Gm40588 12 112816211 to 112817687 1476 - lncRNA gene predicted gene, 40588
Cdca4 12 112820229 to 112829423 9194 - protein coding gene cell division cycle associated 4
Cpgi5185 12 112828673 to 112830159 1486 CpG island CpG island 5185
Tssr117911 12 112829025 to 112829106 81 - TSS region transcription start site region 117911
Tssr115439 12 112829148 to 112829161 13 + TSS region transcription start site region 115439
Tssr117912 12 112829351 to 112829426 75 - TSS region transcription start site region 117912
Tssr3960 12 112829456 to 112829479 23 - TSS region transcription start site region 3960
Tssr117913 12 112829486 to 112829504 18 - TSS region transcription start site region 117913
Tssr115440 12 112829660 to 112829685 25 + TSS region transcription start site region 115440
Tssr115441 12 112831018 to 112831023 5 + TSS region transcription start site region 115441
Cpgi5186 12 112840407 to 112840685 278 CpG island CpG island 5186
Gpr132 12 112850873 to 112868228 17355 - protein coding gene G protein-coupled receptor 132
Tssr3961 12 112853137 to 112853148 11 - TSS region transcription start site region 3961
Tssr115442 12 112855418 to 112855427 9 + TSS region transcription start site region 115442
Gm30461 12 112859982 to 112867649 7667 + lncRNA gene predicted gene, 30461
Tssr115443 12 112860138 to 112860187 49 + TSS region transcription start site region 115443
Tssr117914 12 112860237 to 112860245 8 - TSS region transcription start site region 117914
Tssr117915 12 112860886 to 112860967 81 - TSS region transcription start site region 117915
Tssr117916 12 112860972 to 112860981 9 - TSS region transcription start site region 117916
Tssr115444 12 112861072 to 112861086 14 + TSS region transcription start site region 115444
Tssr115445 12 112861089 to 112861101 12 + TSS region transcription start site region 115445
Tssr115446 12 112861106 to 112861115 9 + TSS region transcription start site region 115446
Tssr115447 12 112862166 to 112862173 7 + TSS region transcription start site region 115447
Tssr115448 12 112866702 to 112866717 15 + TSS region transcription start site region 115448
Tssr117917 12 112868241 to 112868259 18 - TSS region transcription start site region 117917
Cpgi5187 12 112870524 to 112871057 533 CpG island CpG island 5187
Gm47474 12 112873117 to 112873531 414 - pseudogene predicted gene, 47474
Cpgi5188 12 112874239 to 112874560 321 CpG island CpG island 5188
1700127F24Rik 12 112875211 to 112875814 603 - lincRNA gene RIKEN cDNA 1700127F24 gene
Cpgi5189 12 112876371 to 112876681 310 CpG island CpG island 5189
Cpgi5190 12 112877152 to 112878327 1175 CpG island CpG island 5190