Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:112687840-112788121

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67 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi5175 12 112688508 to 112688695 187 CpG island CpG island 5175
Gm30238 12 112690986 to 112693588 2602 - lncRNA gene predicted gene, 30238
Cpgi5176 12 112693319 to 112693968 649 CpG island CpG island 5176
Gm30298 12 112693503 to 112703753 10250 + lncRNA gene predicted gene, 30298
Tssr117885 12 112693542 to 112693618 76 - TSS region transcription start site region 117885
Cpgi5177 12 112700637 to 112701040 403 CpG island CpG island 5177
Cpgi5178 12 112706954 to 112707397 443 CpG island CpG island 5178
Gm46382 12 112711949 to 112721584 9635 - protein coding gene predicted gene, 46382
Tssr115398 12 112719237 to 112719256 19 + TSS region transcription start site region 115398
Tssr115399 12 112721105 to 112721127 22 + TSS region transcription start site region 115399
Cpgi5179 12 112721260 to 112723161 1901 CpG island CpG island 5179
Tssr115400 12 112721504 to 112721530 26 + TSS region transcription start site region 115400
Cep170b 12 112721529 to 112746592 25063 + protein coding gene centrosomal protein 170B
Tssr117886 12 112721692 to 112721710 18 - TSS region transcription start site region 117886
Tssr117887 12 112721730 to 112721753 23 - TSS region transcription start site region 117887
Tssr117888 12 112721760 to 112721774 14 - TSS region transcription start site region 117888
Tssr115401 12 112721829 to 112721849 20 + TSS region transcription start site region 115401
Tssr115402 12 112722163 to 112722239 76 + TSS region transcription start site region 115402
Tssr115403 12 112722510 to 112722534 24 + TSS region transcription start site region 115403
Tssr115404 12 112722795 to 112722821 26 + TSS region transcription start site region 115404
Tssr115405 12 112731119 to 112731122 3 + TSS region transcription start site region 115405
Tssr115406 12 112731209 to 112731218 9 + TSS region transcription start site region 115406
Mir6940 12 112733322 to 112733391 69 + miRNA gene microRNA 6940
Cpgi5180 12 112736404 to 112736621 217 CpG island CpG island 5180
Cpgi5181 12 112737840 to 112738121 281 CpG island CpG island 5181
Gm5189 12 112751271 to 112751531 260 - pseudogene predicted gene 5189
Tssr115407 12 112760432 to 112760447 15 + TSS region transcription start site region 115407
Tssr115408 12 112760652 to 112760659 7 + TSS region transcription start site region 115408
Pld4 12 112760655 to 112768986 8331 + protein coding gene phospholipase D family, member 4
Tssr115409 12 112760683 to 112760717 34 + TSS region transcription start site region 115409
Tssr115410 12 112760719 to 112760742 23 + TSS region transcription start site region 115410
Tssr115411 12 112761630 to 112761644 14 + TSS region transcription start site region 115411
Tssr115412 12 112763448 to 112763480 32 + TSS region transcription start site region 115412
Tssr115413 12 112763998 to 112764050 52 + TSS region transcription start site region 115413
Tssr115414 12 112764494 to 112764514 20 + TSS region transcription start site region 115414
Tssr115415 12 112765033 to 112765050 17 + TSS region transcription start site region 115415
Tssr115416 12 112765061 to 112765082 21 + TSS region transcription start site region 115416
Tssr115417 12 112766705 to 112766724 19 + TSS region transcription start site region 115417
Tssr115418 12 112766742 to 112766753 11 + TSS region transcription start site region 115418
Tssr115419 12 112766776 to 112766795 19 + TSS region transcription start site region 115419
Tssr115420 12 112766796 to 112766807 11 + TSS region transcription start site region 115420
Tssr115421 12 112766843 to 112766854 11 + TSS region transcription start site region 115421
Tssr115422 12 112767484 to 112767514 30 + TSS region transcription start site region 115422
Tssr115423 12 112767515 to 112767543 28 + TSS region transcription start site region 115423
Tssr115424 12 112767553 to 112767580 27 + TSS region transcription start site region 115424
Tssr115425 12 112767595 to 112767612 17 + TSS region transcription start site region 115425
Tssr115426 12 112767801 to 112767821 20 + TSS region transcription start site region 115426
Tssr115427 12 112767824 to 112767852 28 + TSS region transcription start site region 115427
Tssr115428 12 112767876 to 112767892 16 + TSS region transcription start site region 115428
Tssr115429 12 112768483 to 112768503 20 + TSS region transcription start site region 115429
Tssr115430 12 112768619 to 112768691 72 + TSS region transcription start site region 115430
Ahnak2 12 112772194 to 112802657 30463 - protein coding gene AHNAK nucleoprotein 2
Tssr115431 12 112785071 to 112785094 23 + TSS region transcription start site region 115431
Tssr117889 12 112785111 to 112785122 11 - TSS region transcription start site region 117889
Tssr117890 12 112785154 to 112785170 16 - TSS region transcription start site region 117890
Tssr117891 12 112785173 to 112785210 37 - TSS region transcription start site region 117891
Tssr117892 12 112785217 to 112785235 18 - TSS region transcription start site region 117892
Tssr117893 12 112785246 to 112785276 30 - TSS region transcription start site region 117893
Tssr117894 12 112785281 to 112785312 31 - TSS region transcription start site region 117894
Tssr117895 12 112785366 to 112785389 23 - TSS region transcription start site region 117895
Tssr117896 12 112785419 to 112785449 30 - TSS region transcription start site region 117896
Tssr117897 12 112785483 to 112785495 12 - TSS region transcription start site region 117897
Tssr117898 12 112785561 to 112785580 19 - TSS region transcription start site region 117898
Tssr117899 12 112785583 to 112785599 16 - TSS region transcription start site region 117899
Tssr117900 12 112785743 to 112785763 20 - TSS region transcription start site region 117900
Tssr117901 12 112785884 to 112785895 11 - TSS region transcription start site region 117901
Tssr117902 12 112786211 to 112786237 26 - TSS region transcription start site region 117902