Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:112681692-112761710

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zbtb42 12 112678828 to 112682747 3919 + protein coding gene zinc finger and BTB domain containing 42
Cpgi5175 12 112688508 to 112688695 187 CpG island CpG island 5175
Gm30238 12 112690986 to 112693588 2602 - lncRNA gene predicted gene, 30238
Cpgi5176 12 112693319 to 112693968 649 CpG island CpG island 5176
Gm30298 12 112693503 to 112703753 10250 + lncRNA gene predicted gene, 30298
Tssr117885 12 112693542 to 112693618 76 - TSS region transcription start site region 117885
Cpgi5177 12 112700637 to 112701040 403 CpG island CpG island 5177
Cpgi5178 12 112706954 to 112707397 443 CpG island CpG island 5178
Gm46382 12 112711949 to 112721584 9635 - protein coding gene predicted gene, 46382
Tssr115398 12 112719237 to 112719256 19 + TSS region transcription start site region 115398
Tssr115399 12 112721105 to 112721127 22 + TSS region transcription start site region 115399
Cpgi5179 12 112721260 to 112723161 1901 CpG island CpG island 5179
Tssr115400 12 112721504 to 112721530 26 + TSS region transcription start site region 115400
Cep170b 12 112721529 to 112746592 25063 + protein coding gene centrosomal protein 170B
Tssr117886 12 112721692 to 112721710 18 - TSS region transcription start site region 117886
Tssr117887 12 112721730 to 112721753 23 - TSS region transcription start site region 117887
Tssr117888 12 112721760 to 112721774 14 - TSS region transcription start site region 117888
Tssr115401 12 112721829 to 112721849 20 + TSS region transcription start site region 115401
Tssr115402 12 112722163 to 112722239 76 + TSS region transcription start site region 115402
Tssr115403 12 112722510 to 112722534 24 + TSS region transcription start site region 115403
Tssr115404 12 112722795 to 112722821 26 + TSS region transcription start site region 115404
Tssr115405 12 112731119 to 112731122 3 + TSS region transcription start site region 115405
Tssr115406 12 112731209 to 112731218 9 + TSS region transcription start site region 115406
Mir6940 12 112733322 to 112733391 69 + miRNA gene microRNA 6940
Cpgi5180 12 112736404 to 112736621 217 CpG island CpG island 5180
Cpgi5181 12 112737840 to 112738121 281 CpG island CpG island 5181
Gm5189 12 112751271 to 112751531 260 - pseudogene predicted gene 5189
Tssr115407 12 112760432 to 112760447 15 + TSS region transcription start site region 115407
Tssr115408 12 112760652 to 112760659 7 + TSS region transcription start site region 115408
Pld4 12 112760655 to 112768986 8331 + protein coding gene phospholipase D family, member 4
Tssr115409 12 112760683 to 112760717 34 + TSS region transcription start site region 115409
Tssr115410 12 112760719 to 112760742 23 + TSS region transcription start site region 115410
Tssr115411 12 112761630 to 112761644 14 + TSS region transcription start site region 115411