Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:112396136-112626201

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
E330035G20Rik 12 112391526 to 112405812 14286 - lincRNA gene RIKEN cDNA E330035G20 gene
Tssr117863 12 112405724 to 112405733 9 - TSS region transcription start site region 117863
A730018C14Rik 12 112411023 to 112423198 12175 - lncRNA gene RIKEN cDNA A730018C14 gene
B020018J22Rik 12 112428284 to 112435338 7054 - lincRNA gene Riken cDNA B020018J22 gene
A530016L24Rik 12 112489448 to 112499927 10479 + protein coding gene RIKEN cDNA A530016L24 gene
Tssr115371 12 112489461 to 112489479 18 + TSS region transcription start site region 115371
Tssr115372 12 112489533 to 112489538 5 + TSS region transcription start site region 115372
Tssr115373 12 112490740 to 112490754 14 + TSS region transcription start site region 115373
Tmem179 12 112500184 to 112511160 10976 - protein coding gene transmembrane protein 179
Cpgi5168 12 112510620 to 112511604 984 CpG island CpG island 5168
Tssr117864 12 112511103 to 112511135 32 - TSS region transcription start site region 117864
Tssr117865 12 112511136 to 112511201 65 - TSS region transcription start site region 117865
Gm40584 12 112535662 to 112536991 1329 + lncRNA gene predicted gene, 40584
Tssr117866 12 112571202 to 112571247 45 - TSS region transcription start site region 117866
Tssr117867 12 112581177 to 112581203 26 - TSS region transcription start site region 117867
Cpgi5169 12 112588302 to 112589568 1266 CpG island CpG island 5169
Tssr115374 12 112588753 to 112588842 89 + TSS region transcription start site region 115374
Inf2 12 112588784 to 112615557 26773 + protein coding gene inverted formin, FH2 and WH2 domain containing
Tssr115375 12 112589225 to 112589266 41 + TSS region transcription start site region 115375
Gm30048 12 112592836 to 112597875 5039 - lncRNA gene predicted gene, 30048
Tssr115376 12 112599381 to 112599398 17 + TSS region transcription start site region 115376
Tssr115377 12 112604032 to 112604045 13 + TSS region transcription start site region 115377
Tssr115378 12 112604060 to 112604072 12 + TSS region transcription start site region 115378
Tssr115379 12 112604129 to 112604142 13 + TSS region transcription start site region 115379
Tssr115380 12 112604252 to 112604263 11 + TSS region transcription start site region 115380
Cpgi5170 12 112619594 to 112620697 1103 CpG island CpG island 5170
Tssr115381 12 112619921 to 112619947 26 + TSS region transcription start site region 115381
Tssr117868 12 112619936 to 112619973 37 - TSS region transcription start site region 117868
Tssr115382 12 112620030 to 112620056 26 + TSS region transcription start site region 115382
Adssl1 12 112620047 to 112641355 21308 + protein coding gene adenylosuccinate synthetase like 1
Tssr115383 12 112620067 to 112620084 17 + TSS region transcription start site region 115383
Tssr115384 12 112620092 to 112620095 3 + TSS region transcription start site region 115384