Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:112379448-112609927

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D12Mit1003 12 112385118 to 112385226 108 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 1003
D12Mit1002 12 112385202 to 112385325 123 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 1002
E330035G20Rik 12 112391526 to 112405812 14286 - lincRNA gene RIKEN cDNA E330035G20 gene
Tssr117863 12 112405724 to 112405733 9 - TSS region transcription start site region 117863
A730018C14Rik 12 112411023 to 112423198 12175 - lncRNA gene RIKEN cDNA A730018C14 gene
B020018J22Rik 12 112428284 to 112435338 7054 - lincRNA gene Riken cDNA B020018J22 gene
A530016L24Rik 12 112489448 to 112499927 10479 + protein coding gene RIKEN cDNA A530016L24 gene
Tssr115371 12 112489461 to 112489479 18 + TSS region transcription start site region 115371
Tssr115372 12 112489533 to 112489538 5 + TSS region transcription start site region 115372
Tssr115373 12 112490740 to 112490754 14 + TSS region transcription start site region 115373
Tmem179 12 112500184 to 112511160 10976 - protein coding gene transmembrane protein 179
Cpgi5168 12 112510620 to 112511604 984 CpG island CpG island 5168
Tssr117864 12 112511103 to 112511135 32 - TSS region transcription start site region 117864
Tssr117865 12 112511136 to 112511201 65 - TSS region transcription start site region 117865
Gm40584 12 112535662 to 112536991 1329 + lncRNA gene predicted gene, 40584
Tssr117866 12 112571202 to 112571247 45 - TSS region transcription start site region 117866
Tssr117867 12 112581177 to 112581203 26 - TSS region transcription start site region 117867
Cpgi5169 12 112588302 to 112589568 1266 CpG island CpG island 5169
Tssr115374 12 112588753 to 112588842 89 + TSS region transcription start site region 115374
Inf2 12 112588784 to 112615557 26773 + protein coding gene inverted formin, FH2 and WH2 domain containing
Tssr115375 12 112589225 to 112589266 41 + TSS region transcription start site region 115375
Gm30048 12 112592836 to 112597875 5039 - lncRNA gene predicted gene, 30048
Tssr115376 12 112599381 to 112599398 17 + TSS region transcription start site region 115376
Tssr115377 12 112604032 to 112604045 13 + TSS region transcription start site region 115377
Tssr115378 12 112604060 to 112604072 12 + TSS region transcription start site region 115378
Tssr115379 12 112604129 to 112604142 13 + TSS region transcription start site region 115379
Tssr115380 12 112604252 to 112604263 11 + TSS region transcription start site region 115380