Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:11206261-11446314

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49 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D12Mit240 12 11207819 to 11207931 112 DNA segment DNA Segment, Chr 12, Massachusetts Institute of Technology 240
Msgn1 12 11208382 to 11208948 566 - protein coding gene mesogenin 1
Cpgi4416 12 11208445 to 11208786 341 CpG island CpG island 4416
1700034J04Rik 12 11221461 to 11222210 749 - unclassified gene RIKEN cDNA 1700034J04 gene
Gen1 12 11239718 to 11266029 26311 - protein coding gene GEN1, Holliday junction 5' flap endonuclease
Cpgi4417 12 11265401 to 11266864 1463 CpG island CpG island 4417
Tssr115732 12 11265768 to 11265816 48 - TSS region transcription start site region 115732
Tssr112786 12 11265867 to 11265883 16 + TSS region transcription start site region 112786
Smc6 12 11265886 to 11319785 53899 + protein coding gene structural maintenance of chromosomes 6
Tssr112787 12 11266101 to 11266178 77 + TSS region transcription start site region 112787
Tssr112788 12 11266179 to 11266188 9 + TSS region transcription start site region 112788
Tssr112789 12 11266484 to 11266523 39 + TSS region transcription start site region 112789
Tssr112790 12 11266565 to 11266572 7 + TSS region transcription start site region 112790
Tssr112791 12 11276299 to 11276317 18 + TSS region transcription start site region 112791
Tssr112792 12 11279634 to 11279648 14 + TSS region transcription start site region 112792
Tssr112793 12 11279651 to 11279664 13 + TSS region transcription start site region 112793
Tssr112794 12 11279701 to 11279715 14 + TSS region transcription start site region 112794
Tssr112795 12 11280332 to 11280377 45 + TSS region transcription start site region 112795
Tssr112796 12 11282356 to 11282376 20 + TSS region transcription start site region 112796
Tssr112797 12 11289609 to 11289646 37 + TSS region transcription start site region 112797
Tssr112798 12 11295010 to 11295031 21 + TSS region transcription start site region 112798
Tssr112799 12 11297176 to 11297191 15 + TSS region transcription start site region 112799
Mir7675 12 11299887 to 11299944 57 + miRNA gene microRNA 7675
Tssr112800 12 11311567 to 11311571 4 + TSS region transcription start site region 112800
Vsnl1 12 11325242 to 11436613 111371 - protein coding gene visinin-like 1
Tssr115733 12 11325906 to 11325919 13 - TSS region transcription start site region 115733
Tssr112801 12 11326145 to 11326179 34 + TSS region transcription start site region 112801
Tssr115734 12 11326191 to 11326215 24 - TSS region transcription start site region 115734
Tssr115735 12 11326261 to 11326314 53 - TSS region transcription start site region 115735
Tssr115736 12 11326315 to 11326351 36 - TSS region transcription start site region 115736
Tssr115737 12 11326352 to 11326363 11 - TSS region transcription start site region 115737
Tssr115738 12 11326422 to 11326436 14 - TSS region transcription start site region 115738
Tssr115739 12 11326442 to 11326461 19 - TSS region transcription start site region 115739
Tssr115740 12 11326474 to 11326490 16 - TSS region transcription start site region 115740
Tssr115741 12 11326497 to 11326509 12 - TSS region transcription start site region 115741
Tssr115742 12 11332032 to 11332055 23 - TSS region transcription start site region 115742
Tssr115743 12 11332057 to 11332071 14 - TSS region transcription start site region 115743
Tssr115744 12 11386872 to 11386888 16 - TSS region transcription start site region 115744
Tssr115745 12 11435638 to 11435653 15 - TSS region transcription start site region 115745
Tssr3791 12 11436475 to 11436487 12 - TSS region transcription start site region 3791
Cpgi4418 12 11436489 to 11436772 283 CpG island CpG island 4418
Tssr115746 12 11436498 to 11436509 11 - TSS region transcription start site region 115746
Tssr3792 12 11436518 to 11436540 22 - TSS region transcription start site region 3792
Tssr115747 12 11436550 to 11436603 53 - TSS region transcription start site region 115747
Tssr115748 12 11436607 to 11436618 11 - TSS region transcription start site region 115748
Tssr3793 12 11436711 to 11436720 9 - TSS region transcription start site region 3793
Cpgi4419 12 11438020 to 11438277 257 CpG island CpG island 4419
Tssr112802 12 11438191 to 11438238 47 + TSS region transcription start site region 112802
4930511A02Rik 12 11438233 to 11444812 6579 + lincRNA gene RIKEN cDNA 4930511A02 gene