Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:111863055-111953125

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14 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ppp1r13b 12 111828458 to 111908105 79647 - protein coding gene protein phosphatase 1, regulatory subunit 13B
Tssr117850 12 111875655 to 111875659 4 - TSS region transcription start site region 117850
Cpgi5159 12 111907279 to 111909006 1727 CpG island CpG island 5159
Tssr117851 12 111907998 to 111908017 19 - TSS region transcription start site region 117851
Tssr117852 12 111908055 to 111908125 70 - TSS region transcription start site region 117852
Tssr117853 12 111909130 to 111909137 7 - TSS region transcription start site region 117853
Tssr117854 12 111909166 to 111909182 16 - TSS region transcription start site region 117854
Gm40898 12 111920189 to 111923501 3312 + lncRNA gene predicted gene, 40898
Tssr3956 12 111920342 to 111920381 39 + TSS region transcription start site region 3956
Gm3565 12 111930429 to 111931037 608 - pseudogene predicted gene 3565
5033406O09Rik 12 111941991 to 111944482 2491 - lincRNA gene RIKEN cDNA 5033406O09 gene
Tssr115356 12 111944603 to 111944615 12 + TSS region transcription start site region 115356
Tssr115357 12 111944634 to 111944646 12 + TSS region transcription start site region 115357
Gm36757 12 111950517 to 111954152 3635 + lincRNA gene predicted gene, 36757