Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:11171461-11272210

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
9530020I12Rik	12	11185993 to 11204502	18509	-	lincRNA gene	RIKEN cDNA 9530020I12 gene
Cpgi4415	12	11196188 to 11196490	302		CpG island	CpG island 4415
Tssr115729	12	11204286 to 11204303	17	-	TSS region	transcription start site region 115729
Tssr115730	12	11204305 to 11204325	20	-	TSS region	transcription start site region 115730
Tssr115731	12	11204375 to 11204387	12	-	TSS region	transcription start site region 115731
D12Mit240	12	11207819 to 11207931	112		DNA segment	DNA Segment, Chr 12, Massachusetts Institute of Technology 240
Msgn1	12	11208382 to 11208948	566	-	protein coding gene	mesogenin 1
Cpgi4416	12	11208445 to 11208786	341		CpG island	CpG island 4416
1700034J04Rik	12	11221461 to 11222210	749	-	unclassified gene	RIKEN cDNA 1700034J04 gene
Gen1	12	11239718 to 11266029	26311	-	protein coding gene	GEN1, Holliday junction 5' flap endonuclease
Cpgi4417	12	11265401 to 11266864	1463		CpG island	CpG island 4417
Tssr115732	12	11265768 to 11265816	48	-	TSS region	transcription start site region 115732
Tssr112786	12	11265867 to 11265883	16	+	TSS region	transcription start site region 112786
Smc6	12	11265886 to 11319785	53899	+	protein coding gene	structural maintenance of chromosomes 6
Tssr112787	12	11266101 to 11266178	77	+	TSS region	transcription start site region 112787
Tssr112788	12	11266179 to 11266188	9	+	TSS region	transcription start site region 112788
Tssr112789	12	11266484 to 11266523	39	+	TSS region	transcription start site region 112789
Tssr112790	12	11266565 to 11266572	7	+	TSS region	transcription start site region 112790