Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:111542649-111642672

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17 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Eif5 12 111538101 to 111546753 8652 + protein coding gene eukaryotic translation initiation factor 5
Tssr115329 12 111543659 to 111543692 33 + TSS region transcription start site region 115329
Tssr115330 12 111544997 to 111545028 31 + TSS region transcription start site region 115330
Tssr115331 12 111545327 to 111545345 18 + TSS region transcription start site region 115331
Tssr115332 12 111548062 to 111548066 4 + TSS region transcription start site region 115332
Gm48248 12 111558778 to 111559010 232 - pseudogene predicted gene, 48248
2810029C07Rik 12 111572317 to 111574402 2085 - bidirectional promoter lncRNA gene RIKEN cDNA 2810029C07 gene
Cpgi5151 12 111574057 to 111575771 1714 CpG island CpG island 5151
Tssr117830 12 111574309 to 111574342 33 - TSS region transcription start site region 117830
Tssr117831 12 111574384 to 111574405 21 - TSS region transcription start site region 117831
Tssr115333 12 111574491 to 111574542 51 + TSS region transcription start site region 115333
Mark3 12 111574523 to 111656221 81698 + protein coding gene MAP/microtubule affinity regulating kinase 3
Tssr115334 12 111583624 to 111583629 5 + TSS region transcription start site region 115334
Tssr115335 12 111583640 to 111583654 14 + TSS region transcription start site region 115335
Tssr115336 12 111583662 to 111583665 3 + TSS region transcription start site region 115336
Tssr115337 12 111592649 to 111592672 23 + TSS region transcription start site region 115337
Gm48286 12 111616870 to 111637388 20518 + sense overlapping lncRNA gene predicted gene, 48286