Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:111262976-111407718

19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Traf3	12	111166370 to 111267153	100783	+	protein coding gene	TNF receptor-associated factor 3
Cpgi5135	12	111271032 to 111272060	1028		CpG island	CpG island 5135
Tssr115258	12	111271089 to 111271121	32	+	TSS region	transcription start site region 115258
Amn	12	111271096 to 111276426	5330	+	protein coding gene	amnionless
Tssr117809	12	111273029 to 111273034	5	-	TSS region	transcription start site region 117809
Cpgi5136	12	111273832 to 111276133	2301		CpG island	CpG island 5136
Tssr115259	12	111274655 to 111274683	28	+	TSS region	transcription start site region 115259
A230087F16Rik	12	111284429 to 111292887	8458	+	antisense lncRNA gene	RIKEN cDNA A230087F16 gene
Cdc42bpb	12	111292976 to 111377718	84742	-	protein coding gene	CDC42 binding protein kinase beta
Cpgi5137	12	111324366 to 111324860	494		CpG island	CpG island 5137
Cpgi5138	12	111360861 to 111361184	323		CpG island	CpG island 5138
Cpgi5139	12	111376702 to 111378587	1885		CpG island	CpG island 5139
Tssr117810	12	111377438 to 111377502	64	-	TSS region	transcription start site region 117810
Tssr117811	12	111377585 to 111377596	11	-	TSS region	transcription start site region 117811
Tssr117812	12	111377604 to 111377696	92	-	TSS region	transcription start site region 117812
Tssr117813	12	111377705 to 111377719	14	-	TSS region	transcription start site region 117813
Tssr117814	12	111377786 to 111377799	13	-	TSS region	transcription start site region 117814
Cpgi5140	12	111406509 to 111407129	620		CpG island	CpG island 5140
Lbhd2	12	111406809 to 111412090	5281	+	protein coding gene	LBH domain containing 2