Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:110991507-111161511

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi5130 12 110991511 to 110991805 294 CpG island CpG island 5130
Tssr115242 12 110991599 to 110991601 2 + TSS region transcription start site region 115242
Cpgi5131 12 110992029 to 110992906 877 CpG island CpG island 5131
6030440G07Rik 12 110994398 to 111013869 19471 + lincRNA gene RIKEN cDNA 6030440G07 gene
Cpgi5132 12 111007946 to 111008143 197 CpG island CpG island 5132
Gm48631 12 111017444 to 111018402 958 - unclassified gene predicted gene, 48631
Gm35846 12 111028352 to 111034200 5848 + lncRNA gene predicted gene, 35846
Tssr115243 12 111029102 to 111029105 3 + TSS region transcription start site region 115243
Gm46380 12 111034502 to 111038223 3721 + lncRNA gene predicted gene, 46380
Cpgi5133 12 111038274 to 111040465 2191 CpG island CpG island 5133
Tssr115244 12 111039334 to 111039400 66 + TSS region transcription start site region 115244
Rcor1 12 111039351 to 111115901 76550 + protein coding gene REST corepressor 1
Tssr115245 12 111040833 to 111040839 6 + TSS region transcription start site region 115245
Gm46379 12 111067764 to 111068028 264 - pseudogene predicted gene, 46379
Tssr115246 12 111067891 to 111067913 22 + TSS region transcription start site region 115246
Tssr115247 12 111076507 to 111076511 4 + TSS region transcription start site region 115247
Gm10158 12 111079468 to 111081423 1955 unclassified gene predicted gene 10158
Gm48632 12 111091200 to 111093941 2741 + unclassified gene predicted gene, 48632
Tssr115248 12 111152018 to 111152019 1 + TSS region transcription start site region 115248
4930595D18Rik 12 111159850 to 111184491 24641 - protein coding gene RIKEN cDNA 4930595D18 gene
Tssr115249 12 111160190 to 111160201 11 + TSS region transcription start site region 115249
Tssr115250 12 111160216 to 111160227 11 + TSS region transcription start site region 115250
Tssr115251 12 111160263 to 111160272 9 + TSS region transcription start site region 115251